Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.31■□□□□ 0.84
COMMD1Q8N668 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COMMD1Q8N668 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COMMD1Q8N668 LINC00273-201ENST00000539813 1452 ntBASIC20.3■□□□□ 0.84
COMMD1Q8N668 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
COMMD1Q8N668 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COMMD1Q8N668 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.3■□□□□ 0.84
COMMD1Q8N668 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
COMMD1Q8N668 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
COMMD1Q8N668 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COMMD1Q8N668 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.29■□□□□ 0.84
COMMD1Q8N668 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
COMMD1Q8N668 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COMMD1Q8N668 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COMMD1Q8N668 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.28■□□□□ 0.84
COMMD1Q8N668 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
COMMD1Q8N668 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
COMMD1Q8N668 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
COMMD1Q8N668 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.27■□□□□ 0.84
COMMD1Q8N668 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COMMD1Q8N668 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.27■□□□□ 0.84
COMMD1Q8N668 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COMMD1Q8N668 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.26■□□□□ 0.83
COMMD1Q8N668 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD1Q8N668 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.26■□□□□ 0.83
COMMD1Q8N668 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD1Q8N668 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD1Q8N668 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD1Q8N668 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COMMD1Q8N668 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD1Q8N668 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COMMD1Q8N668 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.25■□□□□ 0.83
COMMD1Q8N668 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.25■□□□□ 0.83
COMMD1Q8N668 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD1Q8N668 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD1Q8N668 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COMMD1Q8N668 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COMMD1Q8N668 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD1Q8N668 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD1Q8N668 MIR3648-2-201ENST00000581792 180 ntBASIC20.24■□□□□ 0.83
COMMD1Q8N668 MIR3648-1-201ENST00000615959 180 ntBASIC20.24■□□□□ 0.83
COMMD1Q8N668 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD1Q8N668 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.24■□□□□ 0.83
COMMD1Q8N668 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.24■□□□□ 0.83
COMMD1Q8N668 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
COMMD1Q8N668 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD1Q8N668 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.24■□□□□ 0.83
COMMD1Q8N668 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
COMMD1Q8N668 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD1Q8N668 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD1Q8N668 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD1Q8N668 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD1Q8N668 DUX4L13-201ENST00000554103 1267 ntBASIC20.23■□□□□ 0.83
COMMD1Q8N668 DUX4L15-201ENST00000611059 1267 ntBASIC20.23■□□□□ 0.83
COMMD1Q8N668 DUX4L23-201ENST00000615195 1269 ntBASIC20.23■□□□□ 0.83
COMMD1Q8N668 DUX4L24-201ENST00000617576 1269 ntBASIC20.23■□□□□ 0.83
COMMD1Q8N668 DUX4L22-201ENST00000618238 1269 ntBASIC20.23■□□□□ 0.83
COMMD1Q8N668 DUX4L20-201ENST00000619712 1269 ntBASIC20.23■□□□□ 0.83
COMMD1Q8N668 DUX4L21-201ENST00000622058 1269 ntBASIC20.23■□□□□ 0.83
COMMD1Q8N668 DUX4L10-201ENST00000622460 1267 ntBASIC20.23■□□□□ 0.83
COMMD1Q8N668 DUX4L25-201ENST00000624915 1269 ntBASIC20.23■□□□□ 0.83
COMMD1Q8N668 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.23■□□□□ 0.83
COMMD1Q8N668 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
COMMD1Q8N668 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.23■□□□□ 0.83
COMMD1Q8N668 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD1Q8N668 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COMMD1Q8N668 AC127502.1-201ENST00000399971 1502 ntBASIC20.22■□□□□ 0.83
COMMD1Q8N668 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD1Q8N668 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.22■□□□□ 0.83
COMMD1Q8N668 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD1Q8N668 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COMMD1Q8N668 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.21■□□□□ 0.83
COMMD1Q8N668 MIR639-201ENST00000384974 98 ntBASIC20.21■□□□□ 0.83
COMMD1Q8N668 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
COMMD1Q8N668 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
COMMD1Q8N668 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.2■□□□□ 0.82
COMMD1Q8N668 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COMMD1Q8N668 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD1Q8N668 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD1Q8N668 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD1Q8N668 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD1Q8N668 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.19■□□□□ 0.82
COMMD1Q8N668 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.19■□□□□ 0.82
COMMD1Q8N668 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
COMMD1Q8N668 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD1Q8N668 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COMMD1Q8N668 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COMMD1Q8N668 CR559946.2-201ENST00000623684 991 ntBASIC20.18■□□□□ 0.82
COMMD1Q8N668 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COMMD1Q8N668 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COMMD1Q8N668 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COMMD1Q8N668 AC016575.1-201ENST00000607026 382 ntBASIC20.17■□□□□ 0.82
COMMD1Q8N668 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.17■□□□□ 0.82
COMMD1Q8N668 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD1Q8N668 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD1Q8N668 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COMMD1Q8N668 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.16■□□□□ 0.82
COMMD1Q8N668 AP004833.2-201ENST00000532228 1454 ntBASIC20.16■□□□□ 0.82
COMMD1Q8N668 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COMMD1Q8N668 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms