Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC36.22■■■■□ 3.39
UBR1Q8IWV7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC36.22■■■■□ 3.39
UBR1Q8IWV7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC36.22■■■■□ 3.39
UBR1Q8IWV7 AC100797.4-201ENST00000631653 1827 ntBASIC36.21■■■■□ 3.39
UBR1Q8IWV7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC36.2■■■■□ 3.39
UBR1Q8IWV7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC36.2■■■■□ 3.39
UBR1Q8IWV7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC36.2■■■■□ 3.39
UBR1Q8IWV7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC36.2■■■■□ 3.38
UBR1Q8IWV7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC36.19■■■■□ 3.38
UBR1Q8IWV7 YBX1P4-201ENST00000392794 808 ntBASIC36.19■■■■□ 3.38
UBR1Q8IWV7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC36.19■■■■□ 3.38
UBR1Q8IWV7 AP004833.2-201ENST00000532228 1454 ntBASIC36.19■■■■□ 3.38
UBR1Q8IWV7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
UBR1Q8IWV7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC36.18■■■■□ 3.38
UBR1Q8IWV7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC36.18■■■■□ 3.38
UBR1Q8IWV7 MIR3960-201ENST00000583311 91 ntBASIC36.18■■■■□ 3.38
UBR1Q8IWV7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC36.17■■■■□ 3.38
UBR1Q8IWV7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC36.17■■■■□ 3.38
UBR1Q8IWV7 HYI-210ENST00000486909 905 ntTSL 5 BASIC36.17■■■■□ 3.38
UBR1Q8IWV7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC36.17■■■■□ 3.38
UBR1Q8IWV7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC36.17■■■■□ 3.38
UBR1Q8IWV7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
UBR1Q8IWV7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
UBR1Q8IWV7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC36.16■■■■□ 3.38
UBR1Q8IWV7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC36.15■■■■□ 3.38
UBR1Q8IWV7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC36.15■■■■□ 3.38
UBR1Q8IWV7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC36.15■■■■□ 3.38
UBR1Q8IWV7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC36.15■■■■□ 3.38
UBR1Q8IWV7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
UBR1Q8IWV7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC36.14■■■■□ 3.38
UBR1Q8IWV7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
UBR1Q8IWV7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC36.14■■■■□ 3.38
UBR1Q8IWV7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC36.14■■■■□ 3.38
UBR1Q8IWV7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC36.13■■■■□ 3.37
UBR1Q8IWV7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC36.12■■■■□ 3.37
UBR1Q8IWV7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC36.12■■■■□ 3.37
UBR1Q8IWV7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC36.12■■■■□ 3.37
UBR1Q8IWV7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC36.12■■■■□ 3.37
UBR1Q8IWV7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC36.11■■■■□ 3.37
UBR1Q8IWV7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC36.11■■■■□ 3.37
UBR1Q8IWV7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
UBR1Q8IWV7 AL356441.2-201ENST00000443009 864 ntBASIC36.1■■■■□ 3.37
UBR1Q8IWV7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC36.1■■■■□ 3.37
UBR1Q8IWV7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC36.1■■■■□ 3.37
UBR1Q8IWV7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC36.09■■■■□ 3.37
UBR1Q8IWV7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
UBR1Q8IWV7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC36.08■■■■□ 3.37
UBR1Q8IWV7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC36.08■■■■□ 3.37
UBR1Q8IWV7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
UBR1Q8IWV7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC36.08■■■■□ 3.37
UBR1Q8IWV7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC36.07■■■■□ 3.37
UBR1Q8IWV7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.37
UBR1Q8IWV7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC36.07■■■■□ 3.36
UBR1Q8IWV7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC36.07■■■■□ 3.36
UBR1Q8IWV7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC36.06■■■■□ 3.36
UBR1Q8IWV7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC36.05■■■■□ 3.36
UBR1Q8IWV7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC36.04■■■■□ 3.36
UBR1Q8IWV7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC36.03■■■■□ 3.36
UBR1Q8IWV7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC36.03■■■■□ 3.36
UBR1Q8IWV7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC36.03■■■■□ 3.36
UBR1Q8IWV7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC36.03■■■■□ 3.36
UBR1Q8IWV7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC36.03■■■■□ 3.36
UBR1Q8IWV7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC36.03■■■■□ 3.36
UBR1Q8IWV7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
UBR1Q8IWV7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC36.02■■■■□ 3.36
UBR1Q8IWV7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
UBR1Q8IWV7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC36.01■■■■□ 3.36
UBR1Q8IWV7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC36.01■■■■□ 3.36
UBR1Q8IWV7 AL031848.2-201ENST00000607670 837 ntBASIC36.01■■■■□ 3.36
UBR1Q8IWV7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC36.01■■■■□ 3.35
UBR1Q8IWV7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC36■■■■□ 3.35
UBR1Q8IWV7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC36■■■■□ 3.35
UBR1Q8IWV7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC36■■■■□ 3.35
UBR1Q8IWV7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC36■■■■□ 3.35
UBR1Q8IWV7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
UBR1Q8IWV7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC35.98■■■■□ 3.35
UBR1Q8IWV7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
UBR1Q8IWV7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC35.97■■■■□ 3.35
UBR1Q8IWV7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC35.97■■■■□ 3.35
UBR1Q8IWV7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
UBR1Q8IWV7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC35.97■■■■□ 3.35
UBR1Q8IWV7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
UBR1Q8IWV7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
UBR1Q8IWV7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC35.96■■■■□ 3.35
UBR1Q8IWV7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC35.95■■■■□ 3.35
UBR1Q8IWV7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC35.95■■■■□ 3.35
UBR1Q8IWV7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
UBR1Q8IWV7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC35.95■■■■□ 3.34
UBR1Q8IWV7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC35.94■■■■□ 3.34
UBR1Q8IWV7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC35.94■■■■□ 3.34
UBR1Q8IWV7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC35.94■■■■□ 3.34
UBR1Q8IWV7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
UBR1Q8IWV7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
UBR1Q8IWV7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
UBR1Q8IWV7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
UBR1Q8IWV7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC35.92■■■■□ 3.34
UBR1Q8IWV7 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC35.92■■■■□ 3.34
UBR1Q8IWV7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC35.91■■■■□ 3.34
UBR1Q8IWV7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC35.91■■■■□ 3.34
UBR1Q8IWV7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms