Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CROCCP3Q8IVE0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.34■■□□□ 1.17
CROCCP3Q8IVE0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CROCCP3Q8IVE0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CROCCP3Q8IVE0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CROCCP3Q8IVE0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CROCCP3Q8IVE0 AL031258.1-201ENST00000623562 325 ntBASIC22.34■■□□□ 1.17
CROCCP3Q8IVE0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CROCCP3Q8IVE0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CROCCP3Q8IVE0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CROCCP3Q8IVE0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
CROCCP3Q8IVE0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CROCCP3Q8IVE0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
CROCCP3Q8IVE0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
CROCCP3Q8IVE0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.16
CROCCP3Q8IVE0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CROCCP3Q8IVE0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC22.32■■□□□ 1.16
CROCCP3Q8IVE0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CROCCP3Q8IVE0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CROCCP3Q8IVE0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC22.32■■□□□ 1.16
CROCCP3Q8IVE0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
CROCCP3Q8IVE0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.31■■□□□ 1.16
CROCCP3Q8IVE0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.31■■□□□ 1.16
CROCCP3Q8IVE0 AC092803.2-201ENST00000564287 1899 ntBASIC22.3■■□□□ 1.16
CROCCP3Q8IVE0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CROCCP3Q8IVE0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CROCCP3Q8IVE0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
CROCCP3Q8IVE0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CROCCP3Q8IVE0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
CROCCP3Q8IVE0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CROCCP3Q8IVE0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CROCCP3Q8IVE0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CROCCP3Q8IVE0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.29■■□□□ 1.16
CROCCP3Q8IVE0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CROCCP3Q8IVE0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CROCCP3Q8IVE0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.28■■□□□ 1.16
CROCCP3Q8IVE0 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CROCCP3Q8IVE0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CROCCP3Q8IVE0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CROCCP3Q8IVE0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CROCCP3Q8IVE0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CROCCP3Q8IVE0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CROCCP3Q8IVE0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CROCCP3Q8IVE0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.26■■□□□ 1.15
CROCCP3Q8IVE0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CROCCP3Q8IVE0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC22.26■■□□□ 1.15
CROCCP3Q8IVE0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CROCCP3Q8IVE0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CROCCP3Q8IVE0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CROCCP3Q8IVE0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CROCCP3Q8IVE0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CROCCP3Q8IVE0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CROCCP3Q8IVE0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.24■■□□□ 1.15
CROCCP3Q8IVE0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CROCCP3Q8IVE0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CROCCP3Q8IVE0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CROCCP3Q8IVE0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CROCCP3Q8IVE0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CROCCP3Q8IVE0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CROCCP3Q8IVE0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.23■■□□□ 1.15
CROCCP3Q8IVE0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.23■■□□□ 1.15
CROCCP3Q8IVE0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
CROCCP3Q8IVE0 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CROCCP3Q8IVE0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CROCCP3Q8IVE0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CROCCP3Q8IVE0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CROCCP3Q8IVE0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
CROCCP3Q8IVE0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CROCCP3Q8IVE0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.22■■□□□ 1.15
CROCCP3Q8IVE0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.22■■□□□ 1.15
CROCCP3Q8IVE0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CROCCP3Q8IVE0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CROCCP3Q8IVE0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CROCCP3Q8IVE0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CROCCP3Q8IVE0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CROCCP3Q8IVE0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CROCCP3Q8IVE0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.19■■□□□ 1.14
CROCCP3Q8IVE0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.19■■□□□ 1.14
CROCCP3Q8IVE0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CROCCP3Q8IVE0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.18■■□□□ 1.14
CROCCP3Q8IVE0 AC142381.3-201ENST00000568208 1670 ntBASIC22.18■■□□□ 1.14
CROCCP3Q8IVE0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CROCCP3Q8IVE0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.18■■□□□ 1.14
CROCCP3Q8IVE0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.17■■□□□ 1.14
CROCCP3Q8IVE0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CROCCP3Q8IVE0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CROCCP3Q8IVE0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CROCCP3Q8IVE0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CROCCP3Q8IVE0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CROCCP3Q8IVE0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CROCCP3Q8IVE0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.17■■□□□ 1.14
CROCCP3Q8IVE0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CROCCP3Q8IVE0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CROCCP3Q8IVE0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CROCCP3Q8IVE0 AL139125.2-201ENST00000623134 1869 ntBASIC22.16■■□□□ 1.14
CROCCP3Q8IVE0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CROCCP3Q8IVE0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
CROCCP3Q8IVE0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CROCCP3Q8IVE0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.15■■□□□ 1.14
CROCCP3Q8IVE0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms