Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 AC008813.1-201ENST00000536597 885 ntBASIC30.64■■■□□ 2.5
CHD1LQ86WJ1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CHD1LQ86WJ1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC30.63■■■□□ 2.49
CHD1LQ86WJ1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHD1LQ86WJ1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.63■■■□□ 2.49
CHD1LQ86WJ1 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC30.63■■■□□ 2.49
CHD1LQ86WJ1 ABHD17AP4-201ENST00000411545 909 ntBASIC30.63■■■□□ 2.49
CHD1LQ86WJ1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.62■■■□□ 2.49
CHD1LQ86WJ1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CHD1LQ86WJ1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1LQ86WJ1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1LQ86WJ1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.61■■■□□ 2.49
CHD1LQ86WJ1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1LQ86WJ1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHD1LQ86WJ1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CHD1LQ86WJ1 MIR219A2-201ENST00000608502 1504 ntBASIC30.6■■■□□ 2.49
CHD1LQ86WJ1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CHD1LQ86WJ1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHD1LQ86WJ1 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHD1LQ86WJ1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CHD1LQ86WJ1 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHD1LQ86WJ1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHD1LQ86WJ1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CHD1LQ86WJ1 AC148477.6-201ENST00000623746 465 ntBASIC30.59■■■□□ 2.49
CHD1LQ86WJ1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.59■■■□□ 2.49
CHD1LQ86WJ1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CHD1LQ86WJ1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHD1LQ86WJ1 HLA-V-202ENST00000446817 847 ntBASIC30.58■■■□□ 2.49
CHD1LQ86WJ1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.58■■■□□ 2.49
CHD1LQ86WJ1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHD1LQ86WJ1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.57■■■□□ 2.49
CHD1LQ86WJ1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CHD1LQ86WJ1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
CHD1LQ86WJ1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHD1LQ86WJ1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.57■■■□□ 2.48
CHD1LQ86WJ1 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
CHD1LQ86WJ1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CHD1LQ86WJ1 CR559946.2-201ENST00000623684 991 ntBASIC30.56■■■□□ 2.48
CHD1LQ86WJ1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.56■■■□□ 2.48
CHD1LQ86WJ1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CHD1LQ86WJ1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.54■■■□□ 2.48
CHD1LQ86WJ1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.54■■■□□ 2.48
CHD1LQ86WJ1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.54■■■□□ 2.48
CHD1LQ86WJ1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.54■■■□□ 2.48
CHD1LQ86WJ1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CHD1LQ86WJ1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CHD1LQ86WJ1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
CHD1LQ86WJ1 AC145676.1-201ENST00000514988 2004 ntBASIC30.54■■■□□ 2.48
CHD1LQ86WJ1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CHD1LQ86WJ1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.53■■■□□ 2.48
CHD1LQ86WJ1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CHD1LQ86WJ1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.53■■■□□ 2.48
CHD1LQ86WJ1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CHD1LQ86WJ1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CHD1LQ86WJ1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
CHD1LQ86WJ1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.52■■■□□ 2.48
CHD1LQ86WJ1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
CHD1LQ86WJ1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC30.52■■■□□ 2.48
CHD1LQ86WJ1 AC092803.2-201ENST00000564287 1899 ntBASIC30.52■■■□□ 2.48
CHD1LQ86WJ1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
CHD1LQ86WJ1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHD1LQ86WJ1 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CHD1LQ86WJ1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
CHD1LQ86WJ1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CHD1LQ86WJ1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC30.5■■■□□ 2.47
CHD1LQ86WJ1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.5■■■□□ 2.47
CHD1LQ86WJ1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.5■■■□□ 2.47
CHD1LQ86WJ1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CHD1LQ86WJ1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CHD1LQ86WJ1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
CHD1LQ86WJ1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
CHD1LQ86WJ1 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CHD1LQ86WJ1 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CHD1LQ86WJ1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CHD1LQ86WJ1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CHD1LQ86WJ1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
CHD1LQ86WJ1 MIR3648-2-201ENST00000581792 180 ntBASIC30.46■■■□□ 2.47
CHD1LQ86WJ1 MIR3648-1-201ENST00000615959 180 ntBASIC30.46■■■□□ 2.47
CHD1LQ86WJ1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CHD1LQ86WJ1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC30.46■■■□□ 2.47
CHD1LQ86WJ1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CHD1LQ86WJ1 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CHD1LQ86WJ1 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CHD1LQ86WJ1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.45■■■□□ 2.47
CHD1LQ86WJ1 DUSP8P4-201ENST00000399538 1761 ntBASIC30.45■■■□□ 2.46
CHD1LQ86WJ1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.45■■■□□ 2.46
CHD1LQ86WJ1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
CHD1LQ86WJ1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
CHD1LQ86WJ1 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CHD1LQ86WJ1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.44■■■□□ 2.46
CHD1LQ86WJ1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.44■■■□□ 2.46
CHD1LQ86WJ1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
CHD1LQ86WJ1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CHD1LQ86WJ1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CHD1LQ86WJ1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC30.43■■■□□ 2.46
CHD1LQ86WJ1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CHD1LQ86WJ1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.43■■■□□ 2.46
CHD1LQ86WJ1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CHD1LQ86WJ1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CHD1LQ86WJ1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms