Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
RNF180Q86T96 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
RNF180Q86T96 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.89■■■□□ 2.06
RNF180Q86T96 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.88■■■□□ 2.05
RNF180Q86T96 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
RNF180Q86T96 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
RNF180Q86T96 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.88■■■□□ 2.05
RNF180Q86T96 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
RNF180Q86T96 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.87■■■□□ 2.05
RNF180Q86T96 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.87■■■□□ 2.05
RNF180Q86T96 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RNF180Q86T96 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RNF180Q86T96 AC103834.1-201ENST00000520383 144 ntBASIC27.86■■■□□ 2.05
RNF180Q86T96 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RNF180Q86T96 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.86■■■□□ 2.05
RNF180Q86T96 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.86■■■□□ 2.05
RNF180Q86T96 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
RNF180Q86T96 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RNF180Q86T96 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
RNF180Q86T96 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RNF180Q86T96 HES6-204ENST00000409182 863 ntTSL 2 BASIC27.84■■■□□ 2.05
RNF180Q86T96 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RNF180Q86T96 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RNF180Q86T96 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RNF180Q86T96 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RNF180Q86T96 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.83■■■□□ 2.05
RNF180Q86T96 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
RNF180Q86T96 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
RNF180Q86T96 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.82■■■□□ 2.04
RNF180Q86T96 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RNF180Q86T96 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RNF180Q86T96 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.81■■■□□ 2.04
RNF180Q86T96 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.81■■■□□ 2.04
RNF180Q86T96 PVT1_1.1-201ENST00000615125 194 ntBASIC27.81■■■□□ 2.04
RNF180Q86T96 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RNF180Q86T96 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RNF180Q86T96 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.81■■■□□ 2.04
RNF180Q86T96 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RNF180Q86T96 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.8■■■□□ 2.04
RNF180Q86T96 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RNF180Q86T96 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.8■■■□□ 2.04
RNF180Q86T96 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.8■■■□□ 2.04
RNF180Q86T96 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.79■■■□□ 2.04
RNF180Q86T96 MIR4508-201ENST00000584178 70 ntBASIC27.79■■■□□ 2.04
RNF180Q86T96 AC131212.1-201ENST00000613771 668 ntBASIC27.79■■■□□ 2.04
RNF180Q86T96 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.78■■■□□ 2.04
RNF180Q86T96 IDNK-203ENST00000405990 629 ntTSL 2 BASIC27.77■■■□□ 2.04
RNF180Q86T96 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC27.77■■■□□ 2.04
RNF180Q86T96 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RNF180Q86T96 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.76■■■□□ 2.03
RNF180Q86T96 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.76■■■□□ 2.03
RNF180Q86T96 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.75■■■□□ 2.03
RNF180Q86T96 GUSBP5-201ENST00000418136 578 ntBASIC27.75■■■□□ 2.03
RNF180Q86T96 OR2A1-AS1-204ENST00000470435 602 ntBASIC27.75■■■□□ 2.03
RNF180Q86T96 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RNF180Q86T96 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC27.75■■■□□ 2.03
RNF180Q86T96 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
RNF180Q86T96 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
RNF180Q86T96 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
RNF180Q86T96 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.73■■■□□ 2.03
RNF180Q86T96 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
RNF180Q86T96 AP002414.2-202ENST00000590929 1450 ntBASIC27.73■■■□□ 2.03
RNF180Q86T96 AC019069.1-201ENST00000610008 1333 ntBASIC27.72■■■□□ 2.03
RNF180Q86T96 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.72■■■□□ 2.03
RNF180Q86T96 IDNK-201ENST00000376417 511 ntTSL 5 BASIC27.72■■■□□ 2.03
RNF180Q86T96 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RNF180Q86T96 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
RNF180Q86T96 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.72■■■□□ 2.03
RNF180Q86T96 THA1P-201ENST00000590384 1145 ntBASIC27.72■■■□□ 2.03
RNF180Q86T96 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
RNF180Q86T96 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RNF180Q86T96 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
RNF180Q86T96 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RNF180Q86T96 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RNF180Q86T96 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
RNF180Q86T96 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
RNF180Q86T96 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
RNF180Q86T96 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
RNF180Q86T96 ABCB10P3-201ENST00000561950 2166 ntBASIC27.7■■■□□ 2.03
RNF180Q86T96 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
RNF180Q86T96 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
RNF180Q86T96 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
RNF180Q86T96 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.02
RNF180Q86T96 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.02
RNF180Q86T96 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
RNF180Q86T96 MTX2-204ENST00000443241 799 ntTSL 3 BASIC27.69■■■□□ 2.02
RNF180Q86T96 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RNF180Q86T96 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
RNF180Q86T96 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
RNF180Q86T96 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
RNF180Q86T96 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
RNF180Q86T96 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC27.68■■■□□ 2.02
RNF180Q86T96 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.68■■■□□ 2.02
RNF180Q86T96 AL031848.2-201ENST00000607670 837 ntBASIC27.68■■■□□ 2.02
RNF180Q86T96 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.68■■■□□ 2.02
RNF180Q86T96 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
RNF180Q86T96 AC103724.3-201ENST00000564481 992 ntBASIC27.67■■■□□ 2.02
RNF180Q86T96 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
RNF180Q86T96 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.67■■■□□ 2.02
RNF180Q86T96 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms