Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.37■■□□□ 1.01
CSMD2Q7Z408 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CSMD2Q7Z408 AC074183.2-201ENST00000623112 922 ntBASIC21.37■■□□□ 1.01
CSMD2Q7Z408 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSMD2Q7Z408 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSMD2Q7Z408 Z92544.1-202ENST00000571933 1220 ntBASIC21.36■■□□□ 1.01
CSMD2Q7Z408 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSMD2Q7Z408 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.36■■□□□ 1.01
CSMD2Q7Z408 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.36■■□□□ 1.01
CSMD2Q7Z408 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CSMD2Q7Z408 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.35■■□□□ 1.01
CSMD2Q7Z408 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSMD2Q7Z408 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSMD2Q7Z408 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.35■■□□□ 1.01
CSMD2Q7Z408 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CSMD2Q7Z408 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
CSMD2Q7Z408 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CSMD2Q7Z408 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.35■■□□□ 1.01
CSMD2Q7Z408 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSMD2Q7Z408 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSMD2Q7Z408 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CSMD2Q7Z408 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSMD2Q7Z408 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CSMD2Q7Z408 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
CSMD2Q7Z408 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSMD2Q7Z408 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSMD2Q7Z408 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.34■■□□□ 1.01
CSMD2Q7Z408 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CSMD2Q7Z408 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.33■■□□□ 1.01
CSMD2Q7Z408 AC100797.4-201ENST00000631653 1827 ntBASIC21.33■■□□□ 1.01
CSMD2Q7Z408 AL359258.2-201ENST00000564063 1566 ntBASIC21.33■■□□□ 1
CSMD2Q7Z408 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CSMD2Q7Z408 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSMD2Q7Z408 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.32■■□□□ 1
CSMD2Q7Z408 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CSMD2Q7Z408 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.32■■□□□ 1
CSMD2Q7Z408 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CSMD2Q7Z408 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.32■■□□□ 1
CSMD2Q7Z408 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.32■■□□□ 1
CSMD2Q7Z408 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.32■■□□□ 1
CSMD2Q7Z408 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
CSMD2Q7Z408 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.31■■□□□ 1
CSMD2Q7Z408 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CSMD2Q7Z408 AC093536.1-201ENST00000569153 554 ntBASIC21.31■■□□□ 1
CSMD2Q7Z408 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CSMD2Q7Z408 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.3■■□□□ 1
CSMD2Q7Z408 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.3■■□□□ 1
CSMD2Q7Z408 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CSMD2Q7Z408 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CSMD2Q7Z408 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.28■■□□□ 1
CSMD2Q7Z408 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.28■■□□□ 1
CSMD2Q7Z408 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CSMD2Q7Z408 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.28■■□□□ 1
CSMD2Q7Z408 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.27■■□□□ 1
CSMD2Q7Z408 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CSMD2Q7Z408 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.27■□□□□ 0.99
CSMD2Q7Z408 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.27■□□□□ 0.99
CSMD2Q7Z408 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSMD2Q7Z408 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.26■□□□□ 0.99
CSMD2Q7Z408 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSMD2Q7Z408 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CSMD2Q7Z408 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.26■□□□□ 0.99
CSMD2Q7Z408 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSMD2Q7Z408 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CSMD2Q7Z408 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSMD2Q7Z408 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.25■□□□□ 0.99
CSMD2Q7Z408 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.25■□□□□ 0.99
CSMD2Q7Z408 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSMD2Q7Z408 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.24■□□□□ 0.99
CSMD2Q7Z408 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSMD2Q7Z408 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSMD2Q7Z408 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSMD2Q7Z408 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSMD2Q7Z408 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSMD2Q7Z408 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.23■□□□□ 0.99
CSMD2Q7Z408 AC092666.2-201ENST00000613287 246 ntBASIC21.23■□□□□ 0.99
CSMD2Q7Z408 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.22■□□□□ 0.99
CSMD2Q7Z408 AL135925.1-201ENST00000605920 1701 ntBASIC21.22■□□□□ 0.99
CSMD2Q7Z408 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CSMD2Q7Z408 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSMD2Q7Z408 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSMD2Q7Z408 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.22■□□□□ 0.99
CSMD2Q7Z408 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.22■□□□□ 0.99
CSMD2Q7Z408 AL139246.5-201ENST00000606645 996 ntBASIC21.21■□□□□ 0.99
CSMD2Q7Z408 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CSMD2Q7Z408 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.21■□□□□ 0.99
CSMD2Q7Z408 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.21■□□□□ 0.99
CSMD2Q7Z408 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CSMD2Q7Z408 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.21■□□□□ 0.99
CSMD2Q7Z408 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSMD2Q7Z408 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSMD2Q7Z408 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CSMD2Q7Z408 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSMD2Q7Z408 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
CSMD2Q7Z408 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSMD2Q7Z408 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSMD2Q7Z408 RARRES2P6-201ENST00000567333 442 ntBASIC21.2■□□□□ 0.98
CSMD2Q7Z408 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSMD2Q7Z408 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.19■□□□□ 0.98
CSMD2Q7Z408 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms