Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
RNF44Q7L0R7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF44Q7L0R7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.76■■□□□ 1.39
RNF44Q7L0R7 AL157400.5-201ENST00000507624 621 ntBASIC23.76■■□□□ 1.39
RNF44Q7L0R7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RNF44Q7L0R7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF44Q7L0R7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.75■■□□□ 1.39
RNF44Q7L0R7 RNF126P1-201ENST00000567452 1320 ntBASIC23.75■■□□□ 1.39
RNF44Q7L0R7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RNF44Q7L0R7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.75■■□□□ 1.39
RNF44Q7L0R7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RNF44Q7L0R7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
RNF44Q7L0R7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF44Q7L0R7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RNF44Q7L0R7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.72■■□□□ 1.39
RNF44Q7L0R7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RNF44Q7L0R7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RNF44Q7L0R7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.71■■□□□ 1.39
RNF44Q7L0R7 RARRES2P2-201ENST00000394842 485 ntBASIC23.71■■□□□ 1.39
RNF44Q7L0R7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
RNF44Q7L0R7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RNF44Q7L0R7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.7■■□□□ 1.39
RNF44Q7L0R7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RNF44Q7L0R7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.7■■□□□ 1.38
RNF44Q7L0R7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RNF44Q7L0R7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RNF44Q7L0R7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.38
RNF44Q7L0R7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RNF44Q7L0R7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RNF44Q7L0R7 ECEL1P2-201ENST00000461596 1295 ntBASIC23.69■■□□□ 1.38
RNF44Q7L0R7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RNF44Q7L0R7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RNF44Q7L0R7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
RNF44Q7L0R7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF44Q7L0R7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
RNF44Q7L0R7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RNF44Q7L0R7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.66■■□□□ 1.38
RNF44Q7L0R7 AL449106.1-201ENST00000608517 1980 ntBASIC23.66■■□□□ 1.38
RNF44Q7L0R7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF44Q7L0R7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.66■■□□□ 1.38
RNF44Q7L0R7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
RNF44Q7L0R7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
RNF44Q7L0R7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RNF44Q7L0R7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF44Q7L0R7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RNF44Q7L0R7 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
RNF44Q7L0R7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.64■■□□□ 1.37
RNF44Q7L0R7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.64■■□□□ 1.37
RNF44Q7L0R7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF44Q7L0R7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF44Q7L0R7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF44Q7L0R7 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF44Q7L0R7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC23.63■■□□□ 1.37
RNF44Q7L0R7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RNF44Q7L0R7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF44Q7L0R7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RNF44Q7L0R7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF44Q7L0R7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
RNF44Q7L0R7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
RNF44Q7L0R7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF44Q7L0R7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC23.62■■□□□ 1.37
RNF44Q7L0R7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF44Q7L0R7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RNF44Q7L0R7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RNF44Q7L0R7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RNF44Q7L0R7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.61■■□□□ 1.37
RNF44Q7L0R7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RNF44Q7L0R7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RNF44Q7L0R7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF44Q7L0R7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF44Q7L0R7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF44Q7L0R7 AC025884.2-201ENST00000553429 711 ntBASIC23.6■■□□□ 1.37
RNF44Q7L0R7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.6■■□□□ 1.37
RNF44Q7L0R7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF44Q7L0R7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
RNF44Q7L0R7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RNF44Q7L0R7 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.59■■□□□ 1.37
RNF44Q7L0R7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
RNF44Q7L0R7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.58■■□□□ 1.37
RNF44Q7L0R7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF44Q7L0R7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
RNF44Q7L0R7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.58■■□□□ 1.36
RNF44Q7L0R7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
RNF44Q7L0R7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
RNF44Q7L0R7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF44Q7L0R7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.57■■□□□ 1.36
RNF44Q7L0R7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF44Q7L0R7 AL359504.2-201ENST00000605506 1601 ntBASIC23.57■■□□□ 1.36
RNF44Q7L0R7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RNF44Q7L0R7 SMPD5-203ENST00000639008 1464 ntBASIC23.56■■□□□ 1.36
RNF44Q7L0R7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.56■■□□□ 1.36
RNF44Q7L0R7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.56■■□□□ 1.36
RNF44Q7L0R7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RNF44Q7L0R7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.56■■□□□ 1.36
RNF44Q7L0R7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.55■■□□□ 1.36
RNF44Q7L0R7 ABHD17AP5-201ENST00000580133 923 ntBASIC23.55■■□□□ 1.36
RNF44Q7L0R7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RNF44Q7L0R7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.54■■□□□ 1.36
RNF44Q7L0R7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.54■■□□□ 1.36
RNF44Q7L0R7 AC007029.1-201ENST00000604183 313 ntBASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms