Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.19□□□□□ -0.462e-21■■■■■ 32
LARP4Q71RC2 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.462e-21■■■■■ 32
LARP4Q71RC2 MRPL33-203ENST00000448427 527 ntTSL 49.16□□□□□ -0.942e-21■■■■■ 32
LARP4Q71RC2 MRPL33-206ENST00000483992 729 ntTSL 26.73□□□□□ -1.332e-21■■■■■ 32
LARP4Q71RC2 MRPL33-205ENST00000476552 587 ntTSL 25.26□□□□□ -1.572e-21■■■■■ 32
LARP4Q71RC2 NDUFA5-205ENST00000467117 687 ntTSL 212.3□□□□□ -0.444e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-211ENST00000611607 1504 ntTSL 2 BASIC12.22□□□□□ -0.454e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-212ENST00000618945 1432 ntTSL 2 BASIC11.98□□□□□ -0.494e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-201ENST00000355749 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.564e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-203ENST00000459880 599 ntTSL 29.5□□□□□ -0.894e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-204ENST00000466896 778 ntTSL 39.5□□□□□ -0.894e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-202ENST00000378795 1360 ntTSL 25.86□□□□□ -1.474e-6■■■■■ 31.9
LARP4Q71RC2 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.29□□□□□ -1.564e-6■■■■■ 31.9
LARP4Q71RC2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.87■□□□□ 0.454e-8■■■■■ 31.9
LARP4Q71RC2 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.35□□□□□ -0.274e-8■■■■■ 31.9
LARP4Q71RC2 FGF13-205ENST00000441825 1625 ntTSL 5 BASIC8.04□□□□□ -1.124e-8■■■■■ 31.9
LARP4Q71RC2 FGF13-206ENST00000448673 652 ntTSL 57.93□□□□□ -1.144e-8■■■■■ 31.9
LARP4Q71RC2 FGF13-207ENST00000455663 687 ntTSL 36.5□□□□□ -1.374e-8■■■■■ 31.9
LARP4Q71RC2 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.93□□□□□ -1.32e-7■■■■■ 31.8
LARP4Q71RC2 SNRPC-204ENST00000474635 511 ntTSL 57.87□□□□□ -1.151e-7■■■■■ 31.7
LARP4Q71RC2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.76■■□□□ 1.074e-9■■■■■ 31.7
LARP4Q71RC2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.314e-9■■■■■ 31.7
LARP4Q71RC2 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.55■□□□□ 0.084e-9■■■■■ 31.7
LARP4Q71RC2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.194e-9■■■■■ 31.7
LARP4Q71RC2 HMGN1-217ENST00000489072 1014 ntTSL 322.8■■□□□ 1.241e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-212ENST00000580322 1558 ntTSL 522.25■■□□□ 1.151e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-224ENST00000584557 2000 nt21.91■■□□□ 1.11e-8■■■■■ 31.7
LARP4Q71RC2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.71e-8■■■■■ 31.7
LARP4Q71RC2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.71e-8■■■■■ 31.7
LARP4Q71RC2 C7orf50-208ENST00000491163 621 ntAPPRIS ALT2 TSL 318.33■□□□□ 0.521e-8■■■■■ 31.7
LARP4Q71RC2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.481e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-206ENST00000431390 1552 ntTSL 317.59■□□□□ 0.412e-12■■■■■ 31.7
LARP4Q71RC2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.291e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-207ENST00000436324 1045 ntTSL 216.73■□□□□ 0.271e-8■■■■■ 31.7
LARP4Q71RC2 C7orf50-207ENST00000488073 853 ntTSL 516.66■□□□□ 0.261e-8■■■■■ 31.7
LARP4Q71RC2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.15■□□□□ 0.181e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.12e-12■■■■■ 31.7
LARP4Q71RC2 HMGN1-210ENST00000464078 508 ntTSL 515.58■□□□□ 0.081e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-201ENST00000293208 1272 ntTSL 515.55■□□□□ 0.081e-8■■■■■ 31.7
LARP4Q71RC2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.071e-8■■■■■ 31.7
LARP4Q71RC2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.52■□□□□ 0.071e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.49■□□□□ 0.071e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-217ENST00000582022 2409 ntTSL 1 (best)15.02□□□□□ -0.011e-8■■■■■ 31.7
LARP4Q71RC2 C7orf50-205ENST00000444428 507 ntAPPRIS ALT2 TSL 314.15□□□□□ -0.141e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.73□□□□□ -0.211e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.251e-8■■■■■ 31.7
LARP4Q71RC2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.33□□□□□ -0.283e-16■■■■■ 31.7
LARP4Q71RC2 HMGN1-208ENST00000443046 823 ntTSL 312.91□□□□□ -0.341e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-216ENST00000486741 4299 ntTSL 212.89□□□□□ -0.352e-12■■■■■ 31.7
LARP4Q71RC2 SAP30BP-220ENST00000583329 998 ntTSL 312.57□□□□□ -0.41e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-214ENST00000580601 2786 ntTSL 212.48□□□□□ -0.411e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-220ENST00000492280 2707 ntTSL 512.39□□□□□ -0.432e-12■■■■■ 31.7
LARP4Q71RC2 SAP30BP-207ENST00000578756 652 ntTSL 211.66□□□□□ -0.541e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-209ENST00000579005 462 ntTSL 311.66□□□□□ -0.541e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-213ENST00000482192 793 ntTSL 310.86□□□□□ -0.671e-8■■■■■ 31.7
LARP4Q71RC2 SAP30BP-203ENST00000542343 1011 ntTSL 29.78□□□□□ -0.841e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-215ENST00000485550 745 ntTSL 59.6□□□□□ -0.871e-8■■■■■ 31.7
LARP4Q71RC2 AL031729.1-201ENST00000433132 192 ntBASIC9.26□□□□□ -0.931e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-202ENST00000380747 709 ntTSL 3 BASIC8.48□□□□□ -1.051e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-201ENST00000288344 1303 ntTSL 28.44□□□□□ -1.062e-12■■■■■ 31.7
LARP4Q71RC2 HMGN1-205ENST00000419378 850 ntTSL 26.54□□□□□ -1.361e-8■■■■■ 31.7
LARP4Q71RC2 HMGN1-218ENST00000490032 405 ntTSL 35.78□□□□□ -1.481e-8■■■■■ 31.7
LARP4Q71RC2 RPS21-203ENST00000370592 401 ntTSL 211.15□□□□□ -0.622e-34■■■■■ 31.6
LARP4Q71RC2 MINOS1-202ENST00000462646 335 ntTSL 317.03■□□□□ 0.321e-11■■■■■ 31.6
LARP4Q71RC2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.282e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.072e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.82e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-209ENST00000597793 1716 ntTSL 1 (best)18.74■□□□□ 0.592e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.33■□□□□ 0.042e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-210ENST00000598325 1438 ntTSL 514.74□□□□□ -0.052e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-208ENST00000597730 327 ntTSL 214.09□□□□□ -0.152e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.81□□□□□ -0.22e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-218ENST00000601612 1480 ntTSL 212.56□□□□□ -0.42e-16■■■■■ 31.5
LARP4Q71RC2 PTOV1-216ENST00000601093 522 ntTSL 210.72□□□□□ -0.692e-16■■■■■ 31.5
LARP4Q71RC2 AC087633.2-204ENST00000621842 496 ntTSL 59.54□□□□□ -0.886e-6■■■■■ 31.5
LARP4Q71RC2 AC087633.2-205ENST00000615751 500 ntTSL 56.5□□□□□ -1.376e-6■■■■■ 31.5
LARP4Q71RC2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.562e-12■■■■■ 31.5
LARP4Q71RC2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.52e-12■■■■■ 31.5
LARP4Q71RC2 PTMS-204ENST00000540667 820 ntTSL 212.33□□□□□ -0.442e-12■■■■■ 31.5
LARP4Q71RC2 S100A6-203ENST00000462776 479 ntTSL 212.96□□□□□ -0.335e-7■■■■■ 31.5
LARP4Q71RC2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.233e-22■■■■■ 31.4
LARP4Q71RC2 MZT2B-207ENST00000485869 583 ntTSL 219.91■□□□□ 0.783e-9■■■■■ 31.3
LARP4Q71RC2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.864e-9■■■■■ 31.3
LARP4Q71RC2 PHPT1-205ENST00000492540 1316 ntTSL 1 (best)17.48■□□□□ 0.394e-9■■■■■ 31.3
LARP4Q71RC2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.87■□□□□ 0.134e-9■■■■■ 31.3
LARP4Q71RC2 MAMDC4-205ENST00000485732 4112 ntTSL 1 (best)13.73□□□□□ -0.211e-20■■■■■ 31.3
LARP4Q71RC2 PHPT1-203ENST00000462205 619 ntTSL 313.18□□□□□ -0.34e-9■■■■■ 31.3
LARP4Q71RC2 PHPT1-204ENST00000463215 627 ntTSL 213.08□□□□□ -0.321e-13■■■■■ 31.3
LARP4Q71RC2 PHPT1-206ENST00000497413 618 ntTSL 211.87□□□□□ -0.514e-9■■■■■ 31.3
LARP4Q71RC2 RPS21-202ENST00000370562 1002 ntTSL 2 BASIC11.41□□□□□ -0.581e-34■■■■■ 31.3
LARP4Q71RC2 RPS21-204ENST00000450116 418 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.751e-34■■■■■ 31.3
LARP4Q71RC2 RPL9-211ENST00000514842 2153 ntTSL 511.83□□□□□ -0.522e-10■■■■■ 31.2
LARP4Q71RC2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.382e-10■■■■■ 31.2
LARP4Q71RC2 RPL9-208ENST00000508595 667 ntTSL 35.34□□□□□ -1.552e-10■■■■■ 31.2
LARP4Q71RC2 GMDS-AS1-209ENST00000532124 629 ntTSL 418.5■□□□□ 0.551e-6■■■■■ 31.2
LARP4Q71RC2 GMDS-AS1-203ENST00000524770 565 ntTSL 318.5■□□□□ 0.551e-6■■■■■ 31.2
LARP4Q71RC2 GMDS-AS1-206ENST00000530346 594 ntTSL 416.56■□□□□ 0.241e-6■■■■■ 31.2
LARP4Q71RC2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.15■□□□□ 0.021e-6■■■■■ 31.2
LARP4Q71RC2 GMDS-AS1-208ENST00000531092 744 ntTSL 311.57□□□□□ -0.561e-6■■■■■ 31.2
LARP4Q71RC2 GMDS-AS1-214ENST00000534468 724 ntTSL 310.58□□□□□ -0.721e-6■■■■■ 31.2
Retrieved 100 of 15,922 protein–RNA pairs in 175.6 ms