Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FAM27BQ5VT28 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FAM27BQ5VT28 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FAM27BQ5VT28 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FAM27BQ5VT28 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.75■■□□□ 1.07
FAM27BQ5VT28 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
FAM27BQ5VT28 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.74■■□□□ 1.07
FAM27BQ5VT28 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FAM27BQ5VT28 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.74■■□□□ 1.07
FAM27BQ5VT28 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FAM27BQ5VT28 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FAM27BQ5VT28 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.74■■□□□ 1.07
FAM27BQ5VT28 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FAM27BQ5VT28 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FAM27BQ5VT28 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FAM27BQ5VT28 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
FAM27BQ5VT28 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FAM27BQ5VT28 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FAM27BQ5VT28 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FAM27BQ5VT28 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FAM27BQ5VT28 AP004609.3-201ENST00000610705 1884 ntBASIC21.71■■□□□ 1.07
FAM27BQ5VT28 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FAM27BQ5VT28 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.71■■□□□ 1.07
FAM27BQ5VT28 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
FAM27BQ5VT28 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FAM27BQ5VT28 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FAM27BQ5VT28 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
FAM27BQ5VT28 AC142472.1-201ENST00000612013 1741 ntBASIC21.69■■□□□ 1.06
FAM27BQ5VT28 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM27BQ5VT28 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.69■■□□□ 1.06
FAM27BQ5VT28 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM27BQ5VT28 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FAM27BQ5VT28 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.69■■□□□ 1.06
FAM27BQ5VT28 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
FAM27BQ5VT28 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FAM27BQ5VT28 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FAM27BQ5VT28 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.68■■□□□ 1.06
FAM27BQ5VT28 AL359258.2-201ENST00000564063 1566 ntBASIC21.68■■□□□ 1.06
FAM27BQ5VT28 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
FAM27BQ5VT28 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FAM27BQ5VT28 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.67■■□□□ 1.06
FAM27BQ5VT28 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FAM27BQ5VT28 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FAM27BQ5VT28 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.67■■□□□ 1.06
FAM27BQ5VT28 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
FAM27BQ5VT28 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FAM27BQ5VT28 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.67■■□□□ 1.06
FAM27BQ5VT28 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FAM27BQ5VT28 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
FAM27BQ5VT28 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
FAM27BQ5VT28 AC126177.7-201ENST00000547904 679 ntBASIC21.66■■□□□ 1.06
FAM27BQ5VT28 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.66■■□□□ 1.06
FAM27BQ5VT28 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.66■■□□□ 1.06
FAM27BQ5VT28 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FAM27BQ5VT28 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.66■■□□□ 1.06
FAM27BQ5VT28 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FAM27BQ5VT28 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
FAM27BQ5VT28 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FAM27BQ5VT28 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
FAM27BQ5VT28 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.65■■□□□ 1.06
FAM27BQ5VT28 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
FAM27BQ5VT28 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
FAM27BQ5VT28 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.64■■□□□ 1.06
FAM27BQ5VT28 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
FAM27BQ5VT28 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM27BQ5VT28 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM27BQ5VT28 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM27BQ5VT28 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.64■■□□□ 1.05
FAM27BQ5VT28 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM27BQ5VT28 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FAM27BQ5VT28 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM27BQ5VT28 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM27BQ5VT28 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM27BQ5VT28 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM27BQ5VT28 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FAM27BQ5VT28 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FAM27BQ5VT28 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.63■■□□□ 1.05
FAM27BQ5VT28 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.63■■□□□ 1.05
FAM27BQ5VT28 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FAM27BQ5VT28 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
FAM27BQ5VT28 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FAM27BQ5VT28 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.62■■□□□ 1.05
FAM27BQ5VT28 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FAM27BQ5VT28 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FAM27BQ5VT28 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
FAM27BQ5VT28 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FAM27BQ5VT28 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.61■■□□□ 1.05
FAM27BQ5VT28 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FAM27BQ5VT28 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.61■■□□□ 1.05
FAM27BQ5VT28 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FAM27BQ5VT28 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FAM27BQ5VT28 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FAM27BQ5VT28 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.6■■□□□ 1.05
FAM27BQ5VT28 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FAM27BQ5VT28 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.59■■□□□ 1.05
FAM27BQ5VT28 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
FAM27BQ5VT28 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
FAM27BQ5VT28 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.58■■□□□ 1.05
FAM27BQ5VT28 MIR4449-201ENST00000578365 66 ntBASIC21.58■■□□□ 1.05
FAM27BQ5VT28 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms