Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
CPT1AP50416 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CPT1AP50416 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC27.81■■■□□ 2.04
CPT1AP50416 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.81■■■□□ 2.04
CPT1AP50416 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27.8■■■□□ 2.04
CPT1AP50416 BHLHE23-202ENST00000612929 1109 ntBASIC27.8■■■□□ 2.04
CPT1AP50416 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.8■■■□□ 2.04
CPT1AP50416 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CPT1AP50416 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CPT1AP50416 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
CPT1AP50416 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CPT1AP50416 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.79■■■□□ 2.04
CPT1AP50416 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
CPT1AP50416 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
CPT1AP50416 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CPT1AP50416 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
CPT1AP50416 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CPT1AP50416 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
CPT1AP50416 SPCS2P3-201ENST00000500401 656 ntBASIC27.77■■■□□ 2.04
CPT1AP50416 AC074183.2-201ENST00000623112 922 ntBASIC27.77■■■□□ 2.04
CPT1AP50416 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
CPT1AP50416 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CPT1AP50416 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CPT1AP50416 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.75■■■□□ 2.03
CPT1AP50416 MIR6765-201ENST00000614092 87 ntBASIC27.75■■■□□ 2.03
CPT1AP50416 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
CPT1AP50416 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CPT1AP50416 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.74■■■□□ 2.03
CPT1AP50416 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.74■■■□□ 2.03
CPT1AP50416 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
CPT1AP50416 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.73■■■□□ 2.03
CPT1AP50416 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
CPT1AP50416 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC27.73■■■□□ 2.03
CPT1AP50416 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CPT1AP50416 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.72■■■□□ 2.03
CPT1AP50416 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CPT1AP50416 AC139795.1-202ENST00000500444 432 ntBASIC27.71■■■□□ 2.03
CPT1AP50416 AC010980.1-201ENST00000587192 1142 ntBASIC27.71■■■□□ 2.03
CPT1AP50416 AC018755.3-202ENST00000596210 929 ntBASIC27.71■■■□□ 2.03
CPT1AP50416 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC27.71■■■□□ 2.03
CPT1AP50416 AL035685.1-201ENST00000636663 812 ntBASIC27.71■■■□□ 2.03
CPT1AP50416 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.71■■■□□ 2.03
CPT1AP50416 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CPT1AP50416 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC27.7■■■□□ 2.03
CPT1AP50416 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.7■■■□□ 2.02
CPT1AP50416 HYI-210ENST00000486909 905 ntTSL 5 BASIC27.7■■■□□ 2.02
CPT1AP50416 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
CPT1AP50416 AL451085.2-201ENST00000605085 799 ntBASIC27.7■■■□□ 2.02
CPT1AP50416 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.7■■■□□ 2.02
CPT1AP50416 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CPT1AP50416 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
CPT1AP50416 AL359504.2-201ENST00000605506 1601 ntBASIC27.69■■■□□ 2.02
CPT1AP50416 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
CPT1AP50416 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CPT1AP50416 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.68■■■□□ 2.02
CPT1AP50416 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
CPT1AP50416 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
CPT1AP50416 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
CPT1AP50416 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC27.68■■■□□ 2.02
CPT1AP50416 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC27.67■■■□□ 2.02
CPT1AP50416 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CPT1AP50416 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CPT1AP50416 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC27.67■■■□□ 2.02
CPT1AP50416 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC27.67■■■□□ 2.02
CPT1AP50416 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
CPT1AP50416 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CPT1AP50416 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CPT1AP50416 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
CPT1AP50416 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.67■■■□□ 2.02
CPT1AP50416 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
CPT1AP50416 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CPT1AP50416 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
CPT1AP50416 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
CPT1AP50416 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
CPT1AP50416 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.66■■■□□ 2.02
CPT1AP50416 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
CPT1AP50416 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CPT1AP50416 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC27.65■■■□□ 2.02
CPT1AP50416 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
CPT1AP50416 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC27.64■■■□□ 2.02
CPT1AP50416 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC27.64■■■□□ 2.02
CPT1AP50416 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CPT1AP50416 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
CPT1AP50416 WHAMMP3-201ENST00000611636 1609 ntBASIC27.63■■■□□ 2.01
CPT1AP50416 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.63■■■□□ 2.01
CPT1AP50416 KRT8P33-201ENST00000508125 1423 ntBASIC27.63■■■□□ 2.01
CPT1AP50416 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.63■■■□□ 2.01
CPT1AP50416 ABCB10P1-201ENST00000614297 2181 ntBASIC27.63■■■□□ 2.01
CPT1AP50416 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CPT1AP50416 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CPT1AP50416 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CPT1AP50416 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CPT1AP50416 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
CPT1AP50416 TRIR-205ENST00000592273 783 ntTSL 3 BASIC27.62■■■□□ 2.01
CPT1AP50416 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CPT1AP50416 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
CPT1AP50416 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CPT1AP50416 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.61■■■□□ 2.01
CPT1AP50416 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.61■■■□□ 2.01
CPT1AP50416 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms