Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
RFX5P48382 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RFX5P48382 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RFX5P48382 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
RFX5P48382 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.81■■■□□ 2.52
RFX5P48382 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
RFX5P48382 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
RFX5P48382 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
RFX5P48382 BX255925.1-201ENST00000566954 1854 ntBASIC30.8■■■□□ 2.52
RFX5P48382 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
RFX5P48382 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RFX5P48382 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
RFX5P48382 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.79■■■□□ 2.52
RFX5P48382 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RFX5P48382 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
RFX5P48382 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
RFX5P48382 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
RFX5P48382 AC025884.2-201ENST00000553429 711 ntBASIC30.78■■■□□ 2.52
RFX5P48382 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.78■■■□□ 2.52
RFX5P48382 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
RFX5P48382 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.76■■■□□ 2.52
RFX5P48382 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
RFX5P48382 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.76■■■□□ 2.52
RFX5P48382 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC30.76■■■□□ 2.52
RFX5P48382 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
RFX5P48382 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
RFX5P48382 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RFX5P48382 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
RFX5P48382 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.76■■■□□ 2.51
RFX5P48382 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.75■■■□□ 2.51
RFX5P48382 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RFX5P48382 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RFX5P48382 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.74■■■□□ 2.51
RFX5P48382 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.73■■■□□ 2.51
RFX5P48382 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RFX5P48382 AL449106.1-201ENST00000608517 1980 ntBASIC30.72■■■□□ 2.51
RFX5P48382 U85056.1-201ENST00000616429 682 ntBASIC30.71■■■□□ 2.51
RFX5P48382 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
RFX5P48382 SMPD5-203ENST00000639008 1464 ntBASIC30.7■■■□□ 2.51
RFX5P48382 AC007029.1-201ENST00000604183 313 ntBASIC30.7■■■□□ 2.51
RFX5P48382 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
RFX5P48382 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RFX5P48382 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.69■■■□□ 2.5
RFX5P48382 AL359504.2-201ENST00000605506 1601 ntBASIC30.69■■■□□ 2.5
RFX5P48382 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.68■■■□□ 2.5
RFX5P48382 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.68■■■□□ 2.5
RFX5P48382 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
RFX5P48382 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RFX5P48382 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
RFX5P48382 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RFX5P48382 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.66■■■□□ 2.5
RFX5P48382 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
RFX5P48382 NTF6A-201ENST00000591175 560 ntBASIC30.66■■■□□ 2.5
RFX5P48382 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.65■■■□□ 2.5
RFX5P48382 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
RFX5P48382 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
RFX5P48382 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
RFX5P48382 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
RFX5P48382 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
RFX5P48382 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.63■■■□□ 2.49
RFX5P48382 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
RFX5P48382 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.63■■■□□ 2.49
RFX5P48382 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.63■■■□□ 2.49
RFX5P48382 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
RFX5P48382 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
RFX5P48382 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
RFX5P48382 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
RFX5P48382 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.62■■■□□ 2.49
RFX5P48382 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RFX5P48382 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RFX5P48382 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.61■■■□□ 2.49
RFX5P48382 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RFX5P48382 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.61■■■□□ 2.49
RFX5P48382 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RFX5P48382 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
RFX5P48382 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.6■■■□□ 2.49
RFX5P48382 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.6■■■□□ 2.49
RFX5P48382 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC30.6■■■□□ 2.49
RFX5P48382 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.6■■■□□ 2.49
RFX5P48382 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RFX5P48382 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
RFX5P48382 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.59■■■□□ 2.49
RFX5P48382 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RFX5P48382 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
RFX5P48382 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
RFX5P48382 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.57■■■□□ 2.48
RFX5P48382 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
RFX5P48382 AC009831.1-201ENST00000580420 1582 ntBASIC30.57■■■□□ 2.48
RFX5P48382 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC30.57■■■□□ 2.48
RFX5P48382 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RFX5P48382 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.56■■■□□ 2.48
RFX5P48382 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RFX5P48382 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.56■■■□□ 2.48
RFX5P48382 AC026202.3-201ENST00000600805 1127 ntBASIC30.56■■■□□ 2.48
RFX5P48382 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.56■■■□□ 2.48
RFX5P48382 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
RFX5P48382 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RFX5P48382 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.55■■■□□ 2.48
RFX5P48382 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
RFX5P48382 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms