Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
GDNFP39905 AC018358.1-201ENST00000631079 1402 ntBASIC21.38■■□□□ 1.01
GDNFP39905 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GDNFP39905 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
GDNFP39905 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
GDNFP39905 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
GDNFP39905 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.36■■□□□ 1.01
GDNFP39905 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
GDNFP39905 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
GDNFP39905 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
GDNFP39905 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GDNFP39905 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
GDNFP39905 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
GDNFP39905 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GDNFP39905 AC108673.1-201ENST00000510422 1159 ntBASIC21.34■■□□□ 1.01
GDNFP39905 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GDNFP39905 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.34■■□□□ 1.01
GDNFP39905 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GDNFP39905 RPS2P35-201ENST00000443417 897 ntBASIC21.33■■□□□ 1.01
GDNFP39905 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
GDNFP39905 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GDNFP39905 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
GDNFP39905 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1
GDNFP39905 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GDNFP39905 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.32■■□□□ 1
GDNFP39905 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.32■■□□□ 1
GDNFP39905 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GDNFP39905 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GDNFP39905 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GDNFP39905 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
GDNFP39905 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.3■■□□□ 1
GDNFP39905 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GDNFP39905 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GDNFP39905 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.3■■□□□ 1
GDNFP39905 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.3■■□□□ 1
GDNFP39905 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GDNFP39905 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GDNFP39905 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.3■■□□□ 1
GDNFP39905 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GDNFP39905 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.3■■□□□ 1
GDNFP39905 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.3■■□□□ 1
GDNFP39905 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
GDNFP39905 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
GDNFP39905 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GDNFP39905 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
GDNFP39905 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.29■■□□□ 1
GDNFP39905 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.29■■□□□ 1
GDNFP39905 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GDNFP39905 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.29■■□□□ 1
GDNFP39905 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
GDNFP39905 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GDNFP39905 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GDNFP39905 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.28■■□□□ 1
GDNFP39905 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.28■■□□□ 1
GDNFP39905 AC044849.2-201ENST00000606596 710 ntBASIC21.28■■□□□ 1
GDNFP39905 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GDNFP39905 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GDNFP39905 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GDNFP39905 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
GDNFP39905 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
GDNFP39905 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.27■■□□□ 1
GDNFP39905 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.27■■□□□ 1
GDNFP39905 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
GDNFP39905 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
GDNFP39905 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.26■□□□□ 0.99
GDNFP39905 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
GDNFP39905 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GDNFP39905 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
GDNFP39905 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GDNFP39905 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.25■□□□□ 0.99
GDNFP39905 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
GDNFP39905 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.24■□□□□ 0.99
GDNFP39905 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
GDNFP39905 ERN1-208ENST00000606895 2068 ntBASIC21.24■□□□□ 0.99
GDNFP39905 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDNFP39905 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
GDNFP39905 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDNFP39905 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDNFP39905 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDNFP39905 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDNFP39905 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDNFP39905 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.23■□□□□ 0.99
GDNFP39905 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GDNFP39905 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GDNFP39905 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.22■□□□□ 0.99
GDNFP39905 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.22■□□□□ 0.99
GDNFP39905 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
GDNFP39905 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GDNFP39905 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GDNFP39905 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.21■□□□□ 0.99
GDNFP39905 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
GDNFP39905 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
GDNFP39905 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.2■□□□□ 0.99
GDNFP39905 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GDNFP39905 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GDNFP39905 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.2■□□□□ 0.98
GDNFP39905 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GDNFP39905 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.2■□□□□ 0.98
GDNFP39905 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.2■□□□□ 0.98
GDNFP39905 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms