Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.07■□□□□ 0.48
CKS2P33552 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CKS2P33552 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CKS2P33552 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CKS2P33552 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CKS2P33552 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.06■□□□□ 0.48
CKS2P33552 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CKS2P33552 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CKS2P33552 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CKS2P33552 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CKS2P33552 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.05■□□□□ 0.48
CKS2P33552 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CKS2P33552 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CKS2P33552 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CKS2P33552 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.05■□□□□ 0.48
CKS2P33552 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CKS2P33552 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CKS2P33552 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKS2P33552 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.04■□□□□ 0.48
CKS2P33552 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKS2P33552 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CKS2P33552 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CKS2P33552 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.04■□□□□ 0.48
CKS2P33552 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKS2P33552 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKS2P33552 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CKS2P33552 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CKS2P33552 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.03■□□□□ 0.48
CKS2P33552 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKS2P33552 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CKS2P33552 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.03■□□□□ 0.48
CKS2P33552 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKS2P33552 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKS2P33552 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKS2P33552 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.03■□□□□ 0.48
CKS2P33552 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CKS2P33552 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
CKS2P33552 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CKS2P33552 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CKS2P33552 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CKS2P33552 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CKS2P33552 AP004609.3-201ENST00000610705 1884 ntBASIC18.01■□□□□ 0.47
CKS2P33552 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKS2P33552 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.01■□□□□ 0.47
CKS2P33552 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CKS2P33552 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.01■□□□□ 0.47
CKS2P33552 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKS2P33552 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKS2P33552 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.01■□□□□ 0.47
CKS2P33552 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.01■□□□□ 0.47
CKS2P33552 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKS2P33552 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CKS2P33552 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CKS2P33552 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CKS2P33552 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CKS2P33552 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CKS2P33552 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CKS2P33552 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CKS2P33552 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CKS2P33552 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18■□□□□ 0.47
CKS2P33552 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKS2P33552 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKS2P33552 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CKS2P33552 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.98■□□□□ 0.47
CKS2P33552 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC17.98■□□□□ 0.47
CKS2P33552 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CKS2P33552 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CKS2P33552 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CKS2P33552 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CKS2P33552 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CKS2P33552 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CKS2P33552 ERN1-208ENST00000606895 2068 ntBASIC17.97■□□□□ 0.47
CKS2P33552 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CKS2P33552 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CKS2P33552 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CKS2P33552 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.97■□□□□ 0.47
CKS2P33552 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CKS2P33552 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.96■□□□□ 0.47
CKS2P33552 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CKS2P33552 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.95■□□□□ 0.46
CKS2P33552 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKS2P33552 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKS2P33552 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKS2P33552 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKS2P33552 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CKS2P33552 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CKS2P33552 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKS2P33552 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.94■□□□□ 0.46
CKS2P33552 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKS2P33552 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CKS2P33552 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CKS2P33552 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKS2P33552 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CKS2P33552 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKS2P33552 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKS2P33552 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKS2P33552 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKS2P33552 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CKS2P33552 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CKS2P33552 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms