Protein–RNA interactions for Protein: P27815

PDE4A, cAMP-specific 3',5'-cyclic phosphodiesterase 4A, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4AP27815 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PDE4AP27815 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
PDE4AP27815 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PDE4AP27815 AC110285.7-201ENST00000624417 1536 ntBASIC31.03■■■□□ 2.56
PDE4AP27815 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PDE4AP27815 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
PDE4AP27815 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC31.02■■■□□ 2.56
PDE4AP27815 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
PDE4AP27815 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PDE4AP27815 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.02■■■□□ 2.56
PDE4AP27815 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
PDE4AP27815 DUSP8P4-201ENST00000399538 1761 ntBASIC31.02■■■□□ 2.56
PDE4AP27815 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PDE4AP27815 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PDE4AP27815 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
PDE4AP27815 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
PDE4AP27815 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC31.01■■■□□ 2.55
PDE4AP27815 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC31■■■□□ 2.55
PDE4AP27815 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PDE4AP27815 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC31■■■□□ 2.55
PDE4AP27815 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PDE4AP27815 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.99■■■□□ 2.55
PDE4AP27815 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PDE4AP27815 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.98■■■□□ 2.55
PDE4AP27815 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
PDE4AP27815 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
PDE4AP27815 RPS2P35-201ENST00000443417 897 ntBASIC30.97■■■□□ 2.55
PDE4AP27815 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC30.97■■■□□ 2.55
PDE4AP27815 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
PDE4AP27815 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
PDE4AP27815 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.96■■■□□ 2.55
PDE4AP27815 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
PDE4AP27815 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.96■■■□□ 2.55
PDE4AP27815 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PDE4AP27815 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
PDE4AP27815 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.95■■■□□ 2.55
PDE4AP27815 AC092803.2-201ENST00000564287 1899 ntBASIC30.95■■■□□ 2.55
PDE4AP27815 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
PDE4AP27815 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
PDE4AP27815 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PDE4AP27815 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
PDE4AP27815 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
PDE4AP27815 DUX4L29-201ENST00000425409 679 ntBASIC30.93■■■□□ 2.54
PDE4AP27815 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.93■■■□□ 2.54
PDE4AP27815 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
PDE4AP27815 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.93■■■□□ 2.54
PDE4AP27815 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
PDE4AP27815 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC30.93■■■□□ 2.54
PDE4AP27815 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
PDE4AP27815 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
PDE4AP27815 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.92■■■□□ 2.54
PDE4AP27815 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PDE4AP27815 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.91■■■□□ 2.54
PDE4AP27815 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PDE4AP27815 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC30.89■■■□□ 2.54
PDE4AP27815 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
PDE4AP27815 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
PDE4AP27815 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.88■■■□□ 2.53
PDE4AP27815 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
PDE4AP27815 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PDE4AP27815 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.87■■■□□ 2.53
PDE4AP27815 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PDE4AP27815 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
PDE4AP27815 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.87■■■□□ 2.53
PDE4AP27815 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
PDE4AP27815 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.86■■■□□ 2.53
PDE4AP27815 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
PDE4AP27815 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
PDE4AP27815 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
PDE4AP27815 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PDE4AP27815 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PDE4AP27815 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
PDE4AP27815 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
PDE4AP27815 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.85■■■□□ 2.53
PDE4AP27815 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.85■■■□□ 2.53
PDE4AP27815 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC30.84■■■□□ 2.53
PDE4AP27815 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
PDE4AP27815 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.83■■■□□ 2.53
PDE4AP27815 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PDE4AP27815 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.82■■■□□ 2.52
PDE4AP27815 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
PDE4AP27815 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PDE4AP27815 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PDE4AP27815 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
PDE4AP27815 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PDE4AP27815 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
PDE4AP27815 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
PDE4AP27815 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDE4AP27815 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDE4AP27815 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
PDE4AP27815 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDE4AP27815 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PDE4AP27815 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PDE4AP27815 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PDE4AP27815 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
PDE4AP27815 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
PDE4AP27815 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PDE4AP27815 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.77■■■□□ 2.52
PDE4AP27815 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PDE4AP27815 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms