Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
GDF1P27539 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.5■■□□□ 1.19
GDF1P27539 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
GDF1P27539 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
GDF1P27539 LINC01003-201ENST00000564834 1764 ntBASIC22.49■■□□□ 1.19
GDF1P27539 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.49■■□□□ 1.19
GDF1P27539 NTF6A-201ENST00000591175 560 ntBASIC22.49■■□□□ 1.19
GDF1P27539 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
GDF1P27539 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.49■■□□□ 1.19
GDF1P27539 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
GDF1P27539 SMPD5-203ENST00000639008 1464 ntBASIC22.48■■□□□ 1.19
GDF1P27539 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
GDF1P27539 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
GDF1P27539 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
GDF1P27539 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.48■■□□□ 1.19
GDF1P27539 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
GDF1P27539 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
GDF1P27539 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
GDF1P27539 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.47■■□□□ 1.19
GDF1P27539 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
GDF1P27539 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
GDF1P27539 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.46■■□□□ 1.19
GDF1P27539 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
GDF1P27539 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.46■■□□□ 1.19
GDF1P27539 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
GDF1P27539 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
GDF1P27539 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
GDF1P27539 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.45■■□□□ 1.18
GDF1P27539 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.45■■□□□ 1.18
GDF1P27539 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.45■■□□□ 1.18
GDF1P27539 AC007029.1-201ENST00000604183 313 ntBASIC22.45■■□□□ 1.18
GDF1P27539 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
GDF1P27539 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
GDF1P27539 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
GDF1P27539 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
GDF1P27539 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
GDF1P27539 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.43■■□□□ 1.18
GDF1P27539 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
GDF1P27539 U85056.1-201ENST00000616429 682 ntBASIC22.43■■□□□ 1.18
GDF1P27539 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
GDF1P27539 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
GDF1P27539 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
GDF1P27539 AC142086.6-201ENST00000621154 1765 ntBASIC22.43■■□□□ 1.18
GDF1P27539 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
GDF1P27539 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.42■■□□□ 1.18
GDF1P27539 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
GDF1P27539 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
GDF1P27539 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
GDF1P27539 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
GDF1P27539 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
GDF1P27539 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
GDF1P27539 AC025884.2-201ENST00000553429 711 ntBASIC22.41■■□□□ 1.18
GDF1P27539 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
GDF1P27539 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
GDF1P27539 BX255925.1-201ENST00000566954 1854 ntBASIC22.41■■□□□ 1.18
GDF1P27539 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
GDF1P27539 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
GDF1P27539 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.4■■□□□ 1.18
GDF1P27539 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.4■■□□□ 1.18
GDF1P27539 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
GDF1P27539 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.4■■□□□ 1.18
GDF1P27539 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
GDF1P27539 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
GDF1P27539 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.39■■□□□ 1.17
GDF1P27539 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
GDF1P27539 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
GDF1P27539 AL359504.2-201ENST00000605506 1601 ntBASIC22.39■■□□□ 1.17
GDF1P27539 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
GDF1P27539 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.38■■□□□ 1.17
GDF1P27539 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.38■■□□□ 1.17
GDF1P27539 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
GDF1P27539 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
GDF1P27539 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.38■■□□□ 1.17
GDF1P27539 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.37■■□□□ 1.17
GDF1P27539 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GDF1P27539 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GDF1P27539 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
GDF1P27539 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
GDF1P27539 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
GDF1P27539 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
GDF1P27539 MIR3960-201ENST00000583311 91 ntBASIC22.36■■□□□ 1.17
GDF1P27539 AC012354.3-201ENST00000623734 483 ntBASIC22.36■■□□□ 1.17
GDF1P27539 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
GDF1P27539 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
GDF1P27539 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
GDF1P27539 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.35■■□□□ 1.17
GDF1P27539 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
GDF1P27539 RP9P-202ENST00000450133 1212 ntBASIC22.35■■□□□ 1.17
GDF1P27539 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.35■■□□□ 1.17
GDF1P27539 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
GDF1P27539 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.35■■□□□ 1.17
GDF1P27539 AL449106.1-201ENST00000608517 1980 ntBASIC22.35■■□□□ 1.17
GDF1P27539 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
GDF1P27539 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GDF1P27539 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
GDF1P27539 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.34■■□□□ 1.17
GDF1P27539 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
GDF1P27539 AC133552.2-201ENST00000619106 1032 ntBASIC22.34■■□□□ 1.17
GDF1P27539 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
GDF1P27539 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms