Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM17P0DL12 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC18.21■□□□□ 0.51
SMIM17P0DL12 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM17P0DL12 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SMIM17P0DL12 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SMIM17P0DL12 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM17P0DL12 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SMIM17P0DL12 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.21■□□□□ 0.51
SMIM17P0DL12 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
SMIM17P0DL12 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
SMIM17P0DL12 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM17P0DL12 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SMIM17P0DL12 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SMIM17P0DL12 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM17P0DL12 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM17P0DL12 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.2■□□□□ 0.5
SMIM17P0DL12 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM17P0DL12 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM17P0DL12 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM17P0DL12 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
SMIM17P0DL12 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SMIM17P0DL12 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM17P0DL12 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SMIM17P0DL12 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM17P0DL12 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM17P0DL12 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.18■□□□□ 0.5
SMIM17P0DL12 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM17P0DL12 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.18■□□□□ 0.5
SMIM17P0DL12 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.17■□□□□ 0.5
SMIM17P0DL12 AC091060.1-201ENST00000623524 1766 ntBASIC18.17■□□□□ 0.5
SMIM17P0DL12 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SMIM17P0DL12 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM17P0DL12 AC018358.1-201ENST00000631079 1402 ntBASIC18.17■□□□□ 0.5
SMIM17P0DL12 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM17P0DL12 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SMIM17P0DL12 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.17■□□□□ 0.5
SMIM17P0DL12 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.16■□□□□ 0.5
SMIM17P0DL12 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SMIM17P0DL12 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM17P0DL12 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM17P0DL12 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.15■□□□□ 0.5
SMIM17P0DL12 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.15■□□□□ 0.5
SMIM17P0DL12 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM17P0DL12 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM17P0DL12 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMIM17P0DL12 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.14■□□□□ 0.49
SMIM17P0DL12 AC097358.2-201ENST00000607541 1159 ntBASIC18.14■□□□□ 0.49
SMIM17P0DL12 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMIM17P0DL12 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMIM17P0DL12 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.14■□□□□ 0.49
SMIM17P0DL12 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SMIM17P0DL12 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SMIM17P0DL12 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM17P0DL12 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SMIM17P0DL12 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.13■□□□□ 0.49
SMIM17P0DL12 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM17P0DL12 CAHM-201ENST00000604200 896 ntBASIC18.13■□□□□ 0.49
SMIM17P0DL12 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
SMIM17P0DL12 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM17P0DL12 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM17P0DL12 AC020928.2-201ENST00000588717 2197 ntBASIC18.13■□□□□ 0.49
SMIM17P0DL12 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM17P0DL12 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SMIM17P0DL12 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.12■□□□□ 0.49
SMIM17P0DL12 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM17P0DL12 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SMIM17P0DL12 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM17P0DL12 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM17P0DL12 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM17P0DL12 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM17P0DL12 MIR762-201ENST00000390236 83 ntBASIC18.11■□□□□ 0.49
SMIM17P0DL12 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SMIM17P0DL12 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.11■□□□□ 0.49
SMIM17P0DL12 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM17P0DL12 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM17P0DL12 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.1■□□□□ 0.49
SMIM17P0DL12 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.1■□□□□ 0.49
SMIM17P0DL12 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.1■□□□□ 0.49
SMIM17P0DL12 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.1■□□□□ 0.49
SMIM17P0DL12 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.1■□□□□ 0.49
SMIM17P0DL12 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SMIM17P0DL12 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SMIM17P0DL12 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.09■□□□□ 0.49
SMIM17P0DL12 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.09■□□□□ 0.49
SMIM17P0DL12 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.09■□□□□ 0.49
SMIM17P0DL12 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM17P0DL12 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM17P0DL12 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM17P0DL12 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.09■□□□□ 0.49
SMIM17P0DL12 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM17P0DL12 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM17P0DL12 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM17P0DL12 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.08■□□□□ 0.49
SMIM17P0DL12 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM17P0DL12 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM17P0DL12 AC135983.2-203ENST00000454486 1613 ntBASIC18.08■□□□□ 0.48
SMIM17P0DL12 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SMIM17P0DL12 AC145676.1-201ENST00000514988 2004 ntBASIC18.08■□□□□ 0.48
SMIM17P0DL12 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.08■□□□□ 0.48
SMIM17P0DL12 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms