Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 MSP1YGR028W 1089 nt6.61□□□□□ -1.35
RPL40AP0CH08 EMP65YER140W 1671 nt6.61□□□□□ -1.35
RPL40AP0CH08 SEC24YIL109C 2781 nt6.6□□□□□ -1.35
RPL40AP0CH08 ERG8YMR220W 1356 nt6.6□□□□□ -1.35
RPL40AP0CH08 CCW12YLR110C 402 nt6.6□□□□□ -1.35
RPL40AP0CH08 SUR7YML052W 909 nt6.6□□□□□ -1.35
RPL40AP0CH08 MRPL10YNL284C 969 nt6.6□□□□□ -1.35
RPL40AP0CH08 MLS1YNL117W 1665 nt6.6□□□□□ -1.35
RPL40AP0CH08 MAM3YOL060C 2121 nt6.59□□□□□ -1.35
RPL40AP0CH08 VMA3YEL027W 483 nt6.59□□□□□ -1.35
RPL40AP0CH08 GTS1YGL181W 1191 nt6.59□□□□□ -1.35
RPL40AP0CH08 MOG1YJR074W 657 nt6.59□□□□□ -1.35
RPL40AP0CH08 RTC4YNL254C 1206 nt6.59□□□□□ -1.35
RPL40AP0CH08 CDC23YHR166C 1881 nt6.59□□□□□ -1.35
RPL40AP0CH08 HXT13YEL069C 1695 nt6.58□□□□□ -1.36
RPL40AP0CH08 SNP1YIL061C 903 nt6.58□□□□□ -1.36
RPL40AP0CH08 OM45YIL136W 1182 nt6.58□□□□□ -1.36
RPL40AP0CH08 SNA3YJL151C 402 nt6.58□□□□□ -1.36
RPL40AP0CH08 RTG2YGL252C 1767 nt6.58□□□□□ -1.36
RPL40AP0CH08 IVY1YDR229W 1362 nt6.57□□□□□ -1.36
RPL40AP0CH08 LEO1YOR123C 1395 nt6.57□□□□□ -1.36
RPL40AP0CH08 RMD8YFR048W 1989 nt6.57□□□□□ -1.36
RPL40AP0CH08 YBL113CYBL113C 2379 nt6.57□□□□□ -1.36
RPL40AP0CH08 PLB2YMR006C 2121 nt6.57□□□□□ -1.36
RPL40AP0CH08 RCF2YNR018W 675 nt6.57□□□□□ -1.36
RPL40AP0CH08 RPL10YLR075W 666 nt6.56□□□□□ -1.36
RPL40AP0CH08 ADE2YOR128C 1716 nt6.56□□□□□ -1.36
RPL40AP0CH08 RSC30YHR056C 2652 nt6.55□□□□□ -1.36
RPL40AP0CH08 HST3YOR025W 1344 nt6.55□□□□□ -1.36
RPL40AP0CH08 YNR005CYNR005C 405 nt6.55□□□□□ -1.36
RPL40AP0CH08 YBR056C-BYBR056C-B 159 nt6.55□□□□□ -1.36
RPL40AP0CH08 ECM10YEL030W 1935 nt6.54□□□□□ -1.36
RPL40AP0CH08 FCP1YMR277W 2199 nt6.54□□□□□ -1.36
RPL40AP0CH08 CUP2YGL166W 678 nt6.53□□□□□ -1.36
RPL40AP0CH08 YGR068W-AYGR068W-A 96 nt6.53□□□□□ -1.36
RPL40AP0CH08 GAT4YIR013C 366 nt6.53□□□□□ -1.36
RPL40AP0CH08 MTC2YKL098W 1074 nt6.53□□□□□ -1.36
RPL40AP0CH08 TSR2YLR435W 618 nt6.53□□□□□ -1.36
RPL40AP0CH08 NTG2YOL043C 1143 nt6.53□□□□□ -1.36
RPL40AP0CH08 YBR027CYBR027C 333 nt6.53□□□□□ -1.36
RPL40AP0CH08 RFS1YBR052C 633 nt6.53□□□□□ -1.36
RPL40AP0CH08 CAN1YEL063C 1773 nt6.52□□□□□ -1.37
RPL40AP0CH08 SCS7YMR272C 1155 nt6.52□□□□□ -1.37
RPL40AP0CH08 YBR113WYBR113W 483 nt6.52□□□□□ -1.37
RPL40AP0CH08 TCB1YOR086C 3561 nt6.51□□□□□ -1.37
RPL40AP0CH08 FLC2YAL053W 2352 nt6.5□□□□□ -1.37
RPL40AP0CH08 TPI1YDR050C 747 nt6.5□□□□□ -1.37
RPL40AP0CH08 YPL102CYPL102C 303 nt6.5□□□□□ -1.37
RPL40AP0CH08 YLR173WYLR173W 1827 nt6.5□□□□□ -1.37
RPL40AP0CH08 DSF1YEL070W 1509 nt6.5□□□□□ -1.37
RPL40AP0CH08 YNR073CYNR073C 1509 nt6.5□□□□□ -1.37
RPL40AP0CH08 NUP49YGL172W 1419 nt6.5□□□□□ -1.37
RPL40AP0CH08 PPS1YBR276C 2424 nt6.49□□□□□ -1.37
RPL40AP0CH08 HAM1YJR069C 594 nt6.49□□□□□ -1.37
RPL40AP0CH08 SNF7YLR025W 723 nt6.49□□□□□ -1.37
RPL40AP0CH08 MSS51YLR203C 1311 nt6.49□□□□□ -1.37
RPL40AP0CH08 YJL045WYJL045W 1905 nt6.48□□□□□ -1.37
RPL40AP0CH08 SIT4YDL047W 936 nt6.48□□□□□ -1.37
RPL40AP0CH08 AOS1YPR180W 1044 nt6.48□□□□□ -1.37
RPL40AP0CH08 HNM1YGL077C 1692 nt6.48□□□□□ -1.37
RPL40AP0CH08 MSB3YNL293W 1902 nt6.47□□□□□ -1.37
RPL40AP0CH08 YHR033WYHR033W 1272 nt6.47□□□□□ -1.37
RPL40AP0CH08 PET10YKR046C 852 nt6.47□□□□□ -1.37
RPL40AP0CH08 PNP1YLR209C 936 nt6.47□□□□□ -1.37
RPL40AP0CH08 RTC2YBR147W 891 nt6.47□□□□□ -1.37
RPL40AP0CH08 GCD11YER025W 1584 nt6.47□□□□□ -1.37
RPL40AP0CH08 BRN1YBL097W 2265 nt6.47□□□□□ -1.37
RPL40AP0CH08 BDS1YOL164W 1941 nt6.46□□□□□ -1.37
RPL40AP0CH08 ENB1YOL158C 1821 nt6.46□□□□□ -1.37
RPL40AP0CH08 TIM22YDL217C 624 nt6.46□□□□□ -1.38
RPL40AP0CH08 MHT1YLL062C 975 nt6.46□□□□□ -1.38
RPL40AP0CH08 KTR3YBR205W 1215 nt6.46□□□□□ -1.38
RPL40AP0CH08 RSC4YKR008W 1878 nt6.45□□□□□ -1.38
RPL40AP0CH08 VPS65YLR322W 315 nt6.45□□□□□ -1.38
RPL40AP0CH08 PSY4YBL046W 1326 nt6.45□□□□□ -1.38
RPL40AP0CH08 CDC13YDL220C 2775 nt6.45□□□□□ -1.38
RPL40AP0CH08 TRR1YDR353W 960 nt6.44□□□□□ -1.38
RPL40AP0CH08 PET117YER058W 324 nt6.43□□□□□ -1.38
RPL40AP0CH08 DAL80YKR034W 810 nt6.43□□□□□ -1.38
RPL40AP0CH08 YKR045CYKR045C 552 nt6.43□□□□□ -1.38
RPL40AP0CH08 CUE4YML101C 354 nt6.43□□□□□ -1.38
RPL40AP0CH08 SHP1YBL058W 1272 nt6.43□□□□□ -1.38
RPL40AP0CH08 YPC1YBR183W 951 nt6.43□□□□□ -1.38
RPL40AP0CH08 SRF1YDL133W 1314 nt6.43□□□□□ -1.38
RPL40AP0CH08 RPN11YFR004W 921 nt6.42□□□□□ -1.38
RPL40AP0CH08 HCR1YLR192C 798 nt6.42□□□□□ -1.38
RPL40AP0CH08 YOL099CYOL099C 492 nt6.42□□□□□ -1.38
RPL40AP0CH08 CCR4YAL021C 2514 nt6.41□□□□□ -1.38
RPL40AP0CH08 CAR2YLR438W 1275 nt6.41□□□□□ -1.38
RPL40AP0CH08 UIP5YKR044W 1332 nt6.41□□□□□ -1.38
RPL40AP0CH08 YKL102CYKL102C 306 nt6.4□□□□□ -1.38
RPL40AP0CH08 AIM2YAL049C 741 nt6.4□□□□□ -1.38
RPL40AP0CH08 YLL056CYLL056C 897 nt6.4□□□□□ -1.38
RPL40AP0CH08 LOT6YLR011W 576 nt6.4□□□□□ -1.38
RPL40AP0CH08 FCY2YER056C 1602 nt6.39□□□□□ -1.39
RPL40AP0CH08 YOR389WYOR389W 1875 nt6.39□□□□□ -1.39
RPL40AP0CH08 YCR041WYCR041W 333 nt6.39□□□□□ -1.39
RPL40AP0CH08 SNF4YGL115W 969 nt6.39□□□□□ -1.39
RPL40AP0CH08 PAC10YGR078C 600 nt6.39□□□□□ -1.39
RPL40AP0CH08 YOR012WYOR012W 414 nt6.39□□□□□ -1.39
Retrieved 100 of 7,029 protein–RNA pairs in 9.3 ms