Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC010980.1-201ENST00000587192 1142 ntBASIC28.38■■■□□ 2.13
HOXC6P09630 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.38■■■□□ 2.13
HOXC6P09630 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC28.37■■■□□ 2.13
HOXC6P09630 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
HOXC6P09630 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HOXC6P09630 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.37■■■□□ 2.13
HOXC6P09630 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HOXC6P09630 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
HOXC6P09630 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
HOXC6P09630 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
HOXC6P09630 BHLHE23-202ENST00000612929 1109 ntBASIC28.36■■■□□ 2.13
HOXC6P09630 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HOXC6P09630 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.35■■■□□ 2.13
HOXC6P09630 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.35■■■□□ 2.13
HOXC6P09630 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
HOXC6P09630 MIR6765-201ENST00000614092 87 ntBASIC28.34■■■□□ 2.13
HOXC6P09630 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.34■■■□□ 2.13
HOXC6P09630 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HOXC6P09630 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HOXC6P09630 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
HOXC6P09630 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.33■■■□□ 2.13
HOXC6P09630 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
HOXC6P09630 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HOXC6P09630 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HOXC6P09630 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
HOXC6P09630 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
HOXC6P09630 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
HOXC6P09630 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.31■■■□□ 2.12
HOXC6P09630 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
HOXC6P09630 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
HOXC6P09630 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
HOXC6P09630 AC103834.1-201ENST00000520383 144 ntBASIC28.3■■■□□ 2.12
HOXC6P09630 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
HOXC6P09630 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
HOXC6P09630 ABCB10P1-201ENST00000614297 2181 ntBASIC28.29■■■□□ 2.12
HOXC6P09630 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
HOXC6P09630 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.29■■■□□ 2.12
HOXC6P09630 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC28.29■■■□□ 2.12
HOXC6P09630 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
HOXC6P09630 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
HOXC6P09630 AP002414.2-202ENST00000590929 1450 ntBASIC28.28■■■□□ 2.12
HOXC6P09630 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC28.28■■■□□ 2.12
HOXC6P09630 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
HOXC6P09630 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
HOXC6P09630 KRT8P33-201ENST00000508125 1423 ntBASIC28.27■■■□□ 2.12
HOXC6P09630 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
HOXC6P09630 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
HOXC6P09630 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
HOXC6P09630 AC009299.2-201ENST00000482477 511 ntBASIC28.27■■■□□ 2.12
HOXC6P09630 AC139795.1-202ENST00000500444 432 ntBASIC28.27■■■□□ 2.12
HOXC6P09630 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
HOXC6P09630 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.27■■■□□ 2.12
HOXC6P09630 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
HOXC6P09630 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.26■■■□□ 2.11
HOXC6P09630 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
HOXC6P09630 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.26■■■□□ 2.11
HOXC6P09630 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
HOXC6P09630 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
HOXC6P09630 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
HOXC6P09630 PVT1_1.1-201ENST00000615125 194 ntBASIC28.26■■■□□ 2.11
HOXC6P09630 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.26■■■□□ 2.11
HOXC6P09630 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.26■■■□□ 2.11
HOXC6P09630 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
HOXC6P09630 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
HOXC6P09630 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
HOXC6P09630 AC018755.3-202ENST00000596210 929 ntBASIC28.25■■■□□ 2.11
HOXC6P09630 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.24■■■□□ 2.11
HOXC6P09630 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.24■■■□□ 2.11
HOXC6P09630 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.24■■■□□ 2.11
HOXC6P09630 AL139393.2-201ENST00000608721 2025 ntBASIC28.24■■■□□ 2.11
HOXC6P09630 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
HOXC6P09630 YBX1P4-201ENST00000392794 808 ntBASIC28.23■■■□□ 2.11
HOXC6P09630 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
HOXC6P09630 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.23■■■□□ 2.11
HOXC6P09630 ABCB10P3-201ENST00000561950 2166 ntBASIC28.23■■■□□ 2.11
HOXC6P09630 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
HOXC6P09630 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.22■■■□□ 2.11
HOXC6P09630 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
HOXC6P09630 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.21■■■□□ 2.11
HOXC6P09630 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC28.21■■■□□ 2.11
HOXC6P09630 MIR4508-201ENST00000584178 70 ntBASIC28.21■■■□□ 2.11
HOXC6P09630 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.21■■■□□ 2.11
HOXC6P09630 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
HOXC6P09630 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC28.2■■■□□ 2.1
HOXC6P09630 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HOXC6P09630 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HOXC6P09630 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HOXC6P09630 AL592295.1-201ENST00000400984 884 ntBASIC28.19■■■□□ 2.1
HOXC6P09630 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.19■■■□□ 2.1
HOXC6P09630 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.19■■■□□ 2.1
HOXC6P09630 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
HOXC6P09630 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
HOXC6P09630 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
HOXC6P09630 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
HOXC6P09630 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC28.18■■■□□ 2.1
HOXC6P09630 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
HOXC6P09630 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.18■■■□□ 2.1
HOXC6P09630 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
HOXC6P09630 IDNK-201ENST00000376417 511 ntTSL 5 BASIC28.17■■■□□ 2.1
HOXC6P09630 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms