Protein–RNA interactions for Protein: P09619

PDGFRB, Platelet-derived growth factor receptor beta, humanhuman

Predictions only

Length 1,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRBP09619 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
PDGFRBP09619 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PDGFRBP09619 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.43■■□□□ 1.82
PDGFRBP09619 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
PDGFRBP09619 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
PDGFRBP09619 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PDGFRBP09619 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PDGFRBP09619 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PDGFRBP09619 ECEL1P2-201ENST00000461596 1295 ntBASIC26.42■■□□□ 1.82
PDGFRBP09619 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.42■■□□□ 1.82
PDGFRBP09619 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
PDGFRBP09619 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
PDGFRBP09619 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.42■■□□□ 1.82
PDGFRBP09619 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
PDGFRBP09619 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
PDGFRBP09619 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDGFRBP09619 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.41■■□□□ 1.82
PDGFRBP09619 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
PDGFRBP09619 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PDGFRBP09619 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.4■■□□□ 1.82
PDGFRBP09619 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PDGFRBP09619 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.4■■□□□ 1.82
PDGFRBP09619 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PDGFRBP09619 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PDGFRBP09619 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
PDGFRBP09619 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PDGFRBP09619 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
PDGFRBP09619 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PDGFRBP09619 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDGFRBP09619 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.38■■□□□ 1.81
PDGFRBP09619 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PDGFRBP09619 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
PDGFRBP09619 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDGFRBP09619 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PDGFRBP09619 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.37■■□□□ 1.81
PDGFRBP09619 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.36■■□□□ 1.81
PDGFRBP09619 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.36■■□□□ 1.81
PDGFRBP09619 AL449106.1-201ENST00000608517 1980 ntBASIC26.36■■□□□ 1.81
PDGFRBP09619 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDGFRBP09619 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDGFRBP09619 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PDGFRBP09619 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PDGFRBP09619 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PDGFRBP09619 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
PDGFRBP09619 SMPD5-203ENST00000639008 1464 ntBASIC26.33■■□□□ 1.81
PDGFRBP09619 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDGFRBP09619 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDGFRBP09619 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
PDGFRBP09619 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDGFRBP09619 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.32■■□□□ 1.8
PDGFRBP09619 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDGFRBP09619 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDGFRBP09619 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.31■■□□□ 1.8
PDGFRBP09619 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
PDGFRBP09619 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
PDGFRBP09619 ABHD17AP5-201ENST00000580133 923 ntBASIC26.31■■□□□ 1.8
PDGFRBP09619 AL359504.2-201ENST00000605506 1601 ntBASIC26.31■■□□□ 1.8
PDGFRBP09619 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDGFRBP09619 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.3■■□□□ 1.8
PDGFRBP09619 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDGFRBP09619 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDGFRBP09619 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.3■■□□□ 1.8
PDGFRBP09619 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.29■■□□□ 1.8
PDGFRBP09619 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PDGFRBP09619 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDGFRBP09619 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDGFRBP09619 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDGFRBP09619 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDGFRBP09619 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
PDGFRBP09619 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.28■■□□□ 1.8
PDGFRBP09619 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.28■■□□□ 1.8
PDGFRBP09619 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PDGFRBP09619 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDGFRBP09619 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.27■■□□□ 1.8
PDGFRBP09619 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.27■■□□□ 1.8
PDGFRBP09619 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDGFRBP09619 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
PDGFRBP09619 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PDGFRBP09619 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDGFRBP09619 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PDGFRBP09619 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.26■■□□□ 1.79
PDGFRBP09619 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDGFRBP09619 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDGFRBP09619 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.25■■□□□ 1.79
PDGFRBP09619 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDGFRBP09619 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PDGFRBP09619 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.25■■□□□ 1.79
PDGFRBP09619 AC025884.2-201ENST00000553429 711 ntBASIC26.25■■□□□ 1.79
PDGFRBP09619 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.25■■□□□ 1.79
PDGFRBP09619 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
PDGFRBP09619 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PDGFRBP09619 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.24■■□□□ 1.79
PDGFRBP09619 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.23■■□□□ 1.79
PDGFRBP09619 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.23■■□□□ 1.79
PDGFRBP09619 AC007029.1-201ENST00000604183 313 ntBASIC26.23■■□□□ 1.79
PDGFRBP09619 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDGFRBP09619 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
PDGFRBP09619 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
PDGFRBP09619 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PDGFRBP09619 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms