Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
APPP05067 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.72■■■□□ 2.35
APPP05067 WHAMMP3-201ENST00000611636 1609 ntBASIC29.71■■■□□ 2.35
APPP05067 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.7■■■□□ 2.34
APPP05067 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.69■■■□□ 2.34
APPP05067 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.69■■■□□ 2.34
APPP05067 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.69■■■□□ 2.34
APPP05067 RNF126P1-201ENST00000567452 1320 ntBASIC29.69■■■□□ 2.34
APPP05067 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
APPP05067 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
APPP05067 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
APPP05067 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
APPP05067 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
APPP05067 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
APPP05067 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
APPP05067 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
APPP05067 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
APPP05067 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
APPP05067 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.64■■■□□ 2.34
APPP05067 AC092296.2-201ENST00000589470 999 ntBASIC29.64■■■□□ 2.34
APPP05067 MOB2-207ENST00000614710 705 ntTSL 5 BASIC29.64■■■□□ 2.34
APPP05067 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
APPP05067 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
APPP05067 RARRES2P2-201ENST00000394842 485 ntBASIC29.63■■■□□ 2.33
APPP05067 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
APPP05067 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
APPP05067 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
APPP05067 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.61■■■□□ 2.33
APPP05067 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
APPP05067 AL449106.1-201ENST00000608517 1980 ntBASIC29.61■■■□□ 2.33
APPP05067 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.61■■■□□ 2.33
APPP05067 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
APPP05067 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.6■■■□□ 2.33
APPP05067 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.6■■■□□ 2.33
APPP05067 AL157400.5-201ENST00000507624 621 ntBASIC29.6■■■□□ 2.33
APPP05067 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.6■■■□□ 2.33
APPP05067 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
APPP05067 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
APPP05067 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
APPP05067 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
APPP05067 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
APPP05067 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
APPP05067 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.59■■■□□ 2.33
APPP05067 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
APPP05067 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.33
APPP05067 ECEL1P2-201ENST00000461596 1295 ntBASIC29.58■■■□□ 2.33
APPP05067 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.58■■■□□ 2.33
APPP05067 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
APPP05067 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
APPP05067 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
APPP05067 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
APPP05067 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.57■■■□□ 2.32
APPP05067 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
APPP05067 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.57■■■□□ 2.32
APPP05067 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
APPP05067 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
APPP05067 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
APPP05067 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.56■■■□□ 2.32
APPP05067 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
APPP05067 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
APPP05067 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.55■■■□□ 2.32
APPP05067 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.55■■■□□ 2.32
APPP05067 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
APPP05067 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
APPP05067 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.53■■■□□ 2.32
APPP05067 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.53■■■□□ 2.32
APPP05067 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.53■■■□□ 2.32
APPP05067 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29.52■■■□□ 2.32
APPP05067 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
APPP05067 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
APPP05067 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.51■■■□□ 2.31
APPP05067 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
APPP05067 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.5■■■□□ 2.31
APPP05067 AL359504.2-201ENST00000605506 1601 ntBASIC29.5■■■□□ 2.31
APPP05067 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
APPP05067 SMPD5-203ENST00000639008 1464 ntBASIC29.49■■■□□ 2.31
APPP05067 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
APPP05067 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.49■■■□□ 2.31
APPP05067 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
APPP05067 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
APPP05067 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.48■■■□□ 2.31
APPP05067 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
APPP05067 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.47■■■□□ 2.31
APPP05067 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
APPP05067 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
APPP05067 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
APPP05067 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
APPP05067 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.45■■■□□ 2.31
APPP05067 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.45■■■□□ 2.31
APPP05067 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.45■■■□□ 2.31
APPP05067 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
APPP05067 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
APPP05067 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
APPP05067 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
APPP05067 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
APPP05067 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC29.43■■■□□ 2.3
APPP05067 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.42■■■□□ 2.3
APPP05067 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.42■■■□□ 2.3
APPP05067 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
APPP05067 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms