Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
HLA-DPB1P04440 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HLA-DPB1P04440 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
HLA-DPB1P04440 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
HLA-DPB1P04440 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.05■■□□□ 1.12
HLA-DPB1P04440 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HLA-DPB1P04440 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.04■■□□□ 1.12
HLA-DPB1P04440 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DPB1P04440 DUX4L29-201ENST00000425409 679 ntBASIC22.04■■□□□ 1.12
HLA-DPB1P04440 AC021231.2-201ENST00000594613 730 ntBASIC22.04■■□□□ 1.12
HLA-DPB1P04440 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.04■■□□□ 1.12
HLA-DPB1P04440 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
HLA-DPB1P04440 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HLA-DPB1P04440 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DPB1P04440 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.02■■□□□ 1.12
HLA-DPB1P04440 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DPB1P04440 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DPB1P04440 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DPB1P04440 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HLA-DPB1P04440 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.02■■□□□ 1.12
HLA-DPB1P04440 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.02■■□□□ 1.12
HLA-DPB1P04440 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
HLA-DPB1P04440 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
HLA-DPB1P04440 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DPB1P04440 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
HLA-DPB1P04440 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DPB1P04440 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DPB1P04440 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.01■■□□□ 1.11
HLA-DPB1P04440 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
HLA-DPB1P04440 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HLA-DPB1P04440 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
HLA-DPB1P04440 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DPB1P04440 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DPB1P04440 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22■■□□□ 1.11
HLA-DPB1P04440 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HLA-DPB1P04440 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DPB1P04440 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DPB1P04440 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.99■■□□□ 1.11
HLA-DPB1P04440 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.99■■□□□ 1.11
HLA-DPB1P04440 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HLA-DPB1P04440 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.98■■□□□ 1.11
HLA-DPB1P04440 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HLA-DPB1P04440 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.98■■□□□ 1.11
HLA-DPB1P04440 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
HLA-DPB1P04440 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.98■■□□□ 1.11
HLA-DPB1P04440 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.98■■□□□ 1.11
HLA-DPB1P04440 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.98■■□□□ 1.11
HLA-DPB1P04440 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
HLA-DPB1P04440 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HLA-DPB1P04440 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HLA-DPB1P04440 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HLA-DPB1P04440 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DPB1P04440 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DPB1P04440 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DPB1P04440 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.97■■□□□ 1.11
HLA-DPB1P04440 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.97■■□□□ 1.11
HLA-DPB1P04440 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
HLA-DPB1P04440 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
HLA-DPB1P04440 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.97■■□□□ 1.11
HLA-DPB1P04440 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
HLA-DPB1P04440 LINC00273-201ENST00000539813 1452 ntBASIC21.96■■□□□ 1.11
HLA-DPB1P04440 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DPB1P04440 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DPB1P04440 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
HLA-DPB1P04440 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DPB1P04440 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DPB1P04440 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
HLA-DPB1P04440 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DPB1P04440 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DPB1P04440 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
HLA-DPB1P04440 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
HLA-DPB1P04440 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
HLA-DPB1P04440 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.95■■□□□ 1.1
HLA-DPB1P04440 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.95■■□□□ 1.1
HLA-DPB1P04440 AC135983.2-203ENST00000454486 1613 ntBASIC21.95■■□□□ 1.1
HLA-DPB1P04440 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPB1P04440 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPB1P04440 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DPB1P04440 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.94■■□□□ 1.1
HLA-DPB1P04440 WHAMMP2-203ENST00000563942 1603 ntBASIC21.94■■□□□ 1.1
HLA-DPB1P04440 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DPB1P04440 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DPB1P04440 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DPB1P04440 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DPB1P04440 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DPB1P04440 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DPB1P04440 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
HLA-DPB1P04440 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.93■■□□□ 1.1
HLA-DPB1P04440 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DPB1P04440 AP004609.3-201ENST00000610705 1884 ntBASIC21.92■■□□□ 1.1
HLA-DPB1P04440 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DPB1P04440 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.92■■□□□ 1.1
HLA-DPB1P04440 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
HLA-DPB1P04440 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DPB1P04440 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.92■■□□□ 1.1
HLA-DPB1P04440 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.92■■□□□ 1.1
HLA-DPB1P04440 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.92■■□□□ 1.1
HLA-DPB1P04440 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.91■■□□□ 1.1
HLA-DPB1P04440 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DPB1P04440 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms