Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.05■■□□□ 1.28
PDGFAP04085 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDGFAP04085 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDGFAP04085 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDGFAP04085 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDGFAP04085 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.03■■□□□ 1.28
PDGFAP04085 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.03■■□□□ 1.28
PDGFAP04085 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.02■■□□□ 1.28
PDGFAP04085 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDGFAP04085 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDGFAP04085 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.02■■□□□ 1.28
PDGFAP04085 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.01■■□□□ 1.27
PDGFAP04085 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDGFAP04085 DUX4L9-201ENST00000449051 1259 ntBASIC23.01■■□□□ 1.27
PDGFAP04085 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDGFAP04085 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDGFAP04085 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDGFAP04085 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
PDGFAP04085 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23■■□□□ 1.27
PDGFAP04085 AC025884.2-201ENST00000553429 711 ntBASIC23■■□□□ 1.27
PDGFAP04085 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PDGFAP04085 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PDGFAP04085 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.99■■□□□ 1.27
PDGFAP04085 ST7-AS1-201ENST00000456775 1889 ntBASIC22.99■■□□□ 1.27
PDGFAP04085 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
PDGFAP04085 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.99■■□□□ 1.27
PDGFAP04085 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
PDGFAP04085 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PDGFAP04085 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.98■■□□□ 1.27
PDGFAP04085 AP004833.2-201ENST00000532228 1454 ntBASIC22.98■■□□□ 1.27
PDGFAP04085 SPCS2P3-201ENST00000500401 656 ntBASIC22.98■■□□□ 1.27
PDGFAP04085 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
PDGFAP04085 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.98■■□□□ 1.27
PDGFAP04085 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PDGFAP04085 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDGFAP04085 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDGFAP04085 AC010980.1-201ENST00000587192 1142 ntBASIC22.97■■□□□ 1.27
PDGFAP04085 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.97■■□□□ 1.27
PDGFAP04085 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PDGFAP04085 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDGFAP04085 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
PDGFAP04085 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.97■■□□□ 1.27
PDGFAP04085 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
PDGFAP04085 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDGFAP04085 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PDGFAP04085 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PDGFAP04085 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.96■■□□□ 1.27
PDGFAP04085 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.96■■□□□ 1.27
PDGFAP04085 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PDGFAP04085 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDGFAP04085 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDGFAP04085 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.95■■□□□ 1.26
PDGFAP04085 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.95■■□□□ 1.26
PDGFAP04085 RP9P-202ENST00000450133 1212 ntBASIC22.95■■□□□ 1.26
PDGFAP04085 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
PDGFAP04085 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.95■■□□□ 1.26
PDGFAP04085 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.94■■□□□ 1.26
PDGFAP04085 AC093536.1-201ENST00000569153 554 ntBASIC22.94■■□□□ 1.26
PDGFAP04085 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.94■■□□□ 1.26
PDGFAP04085 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDGFAP04085 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDGFAP04085 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PDGFAP04085 KRT8P33-201ENST00000508125 1423 ntBASIC22.93■■□□□ 1.26
PDGFAP04085 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
PDGFAP04085 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDGFAP04085 RAP2CP1-202ENST00000605179 643 ntBASIC22.93■■□□□ 1.26
PDGFAP04085 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
PDGFAP04085 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDGFAP04085 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
PDGFAP04085 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
PDGFAP04085 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PDGFAP04085 BHLHE23-202ENST00000612929 1109 ntBASIC22.92■■□□□ 1.26
PDGFAP04085 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
PDGFAP04085 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.92■■□□□ 1.26
PDGFAP04085 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDGFAP04085 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PDGFAP04085 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDGFAP04085 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDGFAP04085 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PDGFAP04085 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDGFAP04085 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.91■■□□□ 1.26
PDGFAP04085 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDGFAP04085 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PDGFAP04085 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PDGFAP04085 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.9■■□□□ 1.26
PDGFAP04085 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
PDGFAP04085 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.89■■□□□ 1.25
PDGFAP04085 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
PDGFAP04085 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
PDGFAP04085 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.89■■□□□ 1.25
PDGFAP04085 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDGFAP04085 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDGFAP04085 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDGFAP04085 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
PDGFAP04085 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDGFAP04085 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PDGFAP04085 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
PDGFAP04085 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDGFAP04085 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDGFAP04085 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.87■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms