Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SCGB2A1O75556 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SCGB2A1O75556 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC19.38■□□□□ 0.69
SCGB2A1O75556 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SCGB2A1O75556 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SCGB2A1O75556 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SCGB2A1O75556 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SCGB2A1O75556 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.37■□□□□ 0.69
SCGB2A1O75556 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCGB2A1O75556 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SCGB2A1O75556 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCGB2A1O75556 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCGB2A1O75556 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.36■□□□□ 0.69
SCGB2A1O75556 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.36■□□□□ 0.69
SCGB2A1O75556 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SCGB2A1O75556 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SCGB2A1O75556 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SCGB2A1O75556 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.36■□□□□ 0.69
SCGB2A1O75556 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.35■□□□□ 0.69
SCGB2A1O75556 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SCGB2A1O75556 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.35■□□□□ 0.69
SCGB2A1O75556 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.35■□□□□ 0.69
SCGB2A1O75556 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCGB2A1O75556 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.35■□□□□ 0.69
SCGB2A1O75556 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.35■□□□□ 0.69
SCGB2A1O75556 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.34■□□□□ 0.69
SCGB2A1O75556 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCGB2A1O75556 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SCGB2A1O75556 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCGB2A1O75556 LINC01971-201ENST00000617888 1048 ntBASIC19.34■□□□□ 0.69
SCGB2A1O75556 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCGB2A1O75556 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.34■□□□□ 0.69
SCGB2A1O75556 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCGB2A1O75556 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCGB2A1O75556 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SCGB2A1O75556 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.33■□□□□ 0.68
SCGB2A1O75556 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SCGB2A1O75556 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCGB2A1O75556 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SCGB2A1O75556 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCGB2A1O75556 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCGB2A1O75556 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SCGB2A1O75556 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SCGB2A1O75556 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCGB2A1O75556 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCGB2A1O75556 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.32■□□□□ 0.68
SCGB2A1O75556 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.32■□□□□ 0.68
SCGB2A1O75556 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.32■□□□□ 0.68
SCGB2A1O75556 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCGB2A1O75556 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.31■□□□□ 0.68
SCGB2A1O75556 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCGB2A1O75556 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCGB2A1O75556 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCGB2A1O75556 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.3■□□□□ 0.68
SCGB2A1O75556 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.29■□□□□ 0.68
SCGB2A1O75556 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCGB2A1O75556 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SCGB2A1O75556 AC008813.1-201ENST00000536597 885 ntBASIC19.29■□□□□ 0.68
SCGB2A1O75556 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCGB2A1O75556 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCGB2A1O75556 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
SCGB2A1O75556 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.28■□□□□ 0.68
SCGB2A1O75556 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.28■□□□□ 0.68
SCGB2A1O75556 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.28■□□□□ 0.68
SCGB2A1O75556 WHAMMP3-201ENST00000611636 1609 ntBASIC19.28■□□□□ 0.68
SCGB2A1O75556 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCGB2A1O75556 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SCGB2A1O75556 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCGB2A1O75556 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.27■□□□□ 0.68
SCGB2A1O75556 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SCGB2A1O75556 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.27■□□□□ 0.68
SCGB2A1O75556 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.27■□□□□ 0.68
SCGB2A1O75556 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SCGB2A1O75556 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCGB2A1O75556 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.26■□□□□ 0.67
SCGB2A1O75556 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCGB2A1O75556 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCGB2A1O75556 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.26■□□□□ 0.67
SCGB2A1O75556 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SCGB2A1O75556 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.26■□□□□ 0.67
SCGB2A1O75556 AP004609.3-201ENST00000610705 1884 ntBASIC19.26■□□□□ 0.67
SCGB2A1O75556 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.25■□□□□ 0.67
SCGB2A1O75556 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCGB2A1O75556 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCGB2A1O75556 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.25■□□□□ 0.67
SCGB2A1O75556 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCGB2A1O75556 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SCGB2A1O75556 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCGB2A1O75556 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SCGB2A1O75556 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SCGB2A1O75556 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCGB2A1O75556 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCGB2A1O75556 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCGB2A1O75556 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SCGB2A1O75556 RPS2P35-201ENST00000443417 897 ntBASIC19.24■□□□□ 0.67
SCGB2A1O75556 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCGB2A1O75556 AL449106.1-201ENST00000608517 1980 ntBASIC19.23■□□□□ 0.67
SCGB2A1O75556 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCGB2A1O75556 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCGB2A1O75556 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms