Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TSPAN3O60637 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TSPAN3O60637 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TSPAN3O60637 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
TSPAN3O60637 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TSPAN3O60637 LINC01003-201ENST00000564834 1764 ntBASIC25.57■■□□□ 1.68
TSPAN3O60637 WHAMMP3-201ENST00000611636 1609 ntBASIC25.57■■□□□ 1.68
TSPAN3O60637 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.57■■□□□ 1.68
TSPAN3O60637 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TSPAN3O60637 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.57■■□□□ 1.68
TSPAN3O60637 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
TSPAN3O60637 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TSPAN3O60637 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TSPAN3O60637 SMPD5-203ENST00000639008 1464 ntBASIC25.56■■□□□ 1.68
TSPAN3O60637 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.56■■□□□ 1.68
TSPAN3O60637 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.56■■□□□ 1.68
TSPAN3O60637 U85056.1-201ENST00000616429 682 ntBASIC25.56■■□□□ 1.68
TSPAN3O60637 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
TSPAN3O60637 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TSPAN3O60637 NTF6A-201ENST00000591175 560 ntBASIC25.55■■□□□ 1.68
TSPAN3O60637 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TSPAN3O60637 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
TSPAN3O60637 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TSPAN3O60637 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TSPAN3O60637 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.54■■□□□ 1.68
TSPAN3O60637 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TSPAN3O60637 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TSPAN3O60637 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
TSPAN3O60637 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.53■■□□□ 1.68
TSPAN3O60637 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TSPAN3O60637 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.52■■□□□ 1.68
TSPAN3O60637 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TSPAN3O60637 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TSPAN3O60637 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.52■■□□□ 1.68
TSPAN3O60637 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
TSPAN3O60637 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.52■■□□□ 1.68
TSPAN3O60637 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.51■■□□□ 1.67
TSPAN3O60637 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TSPAN3O60637 AC007029.1-201ENST00000604183 313 ntBASIC25.51■■□□□ 1.67
TSPAN3O60637 AC142086.6-201ENST00000621154 1765 ntBASIC25.51■■□□□ 1.67
TSPAN3O60637 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.51■■□□□ 1.67
TSPAN3O60637 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
TSPAN3O60637 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TSPAN3O60637 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.49■■□□□ 1.67
TSPAN3O60637 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TSPAN3O60637 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TSPAN3O60637 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TSPAN3O60637 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.49■■□□□ 1.67
TSPAN3O60637 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.49■■□□□ 1.67
TSPAN3O60637 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
TSPAN3O60637 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
TSPAN3O60637 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.48■■□□□ 1.67
TSPAN3O60637 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
TSPAN3O60637 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TSPAN3O60637 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
TSPAN3O60637 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
TSPAN3O60637 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.47■■□□□ 1.67
TSPAN3O60637 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TSPAN3O60637 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.47■■□□□ 1.67
TSPAN3O60637 AC025884.2-201ENST00000553429 711 ntBASIC25.47■■□□□ 1.67
TSPAN3O60637 AL359504.2-201ENST00000605506 1601 ntBASIC25.47■■□□□ 1.67
TSPAN3O60637 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.47■■□□□ 1.67
TSPAN3O60637 BX255925.1-201ENST00000566954 1854 ntBASIC25.47■■□□□ 1.67
TSPAN3O60637 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
TSPAN3O60637 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
TSPAN3O60637 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.46■■□□□ 1.67
TSPAN3O60637 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TSPAN3O60637 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TSPAN3O60637 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
TSPAN3O60637 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TSPAN3O60637 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TSPAN3O60637 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.44■■□□□ 1.66
TSPAN3O60637 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TSPAN3O60637 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.44■■□□□ 1.66
TSPAN3O60637 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
TSPAN3O60637 AL449106.1-201ENST00000608517 1980 ntBASIC25.44■■□□□ 1.66
TSPAN3O60637 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.43■■□□□ 1.66
TSPAN3O60637 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.43■■□□□ 1.66
TSPAN3O60637 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.43■■□□□ 1.66
TSPAN3O60637 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
TSPAN3O60637 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.42■■□□□ 1.66
TSPAN3O60637 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TSPAN3O60637 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
TSPAN3O60637 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.42■■□□□ 1.66
TSPAN3O60637 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.42■■□□□ 1.66
TSPAN3O60637 AC009831.1-201ENST00000580420 1582 ntBASIC25.41■■□□□ 1.66
TSPAN3O60637 KRT18P60-201ENST00000312876 1297 ntBASIC25.41■■□□□ 1.66
TSPAN3O60637 AC133552.2-201ENST00000619106 1032 ntBASIC25.41■■□□□ 1.66
TSPAN3O60637 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TSPAN3O60637 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TSPAN3O60637 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC25.4■■□□□ 1.66
TSPAN3O60637 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TSPAN3O60637 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TSPAN3O60637 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TSPAN3O60637 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
TSPAN3O60637 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TSPAN3O60637 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
TSPAN3O60637 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TSPAN3O60637 RP9P-202ENST00000450133 1212 ntBASIC25.39■■□□□ 1.66
TSPAN3O60637 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms