Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.82■■□□□ 1.56
GFRA3O60609 UNC93B8-201ENST00000511903 705 ntBASIC24.82■■□□□ 1.56
GFRA3O60609 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
GFRA3O60609 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC24.81■■□□□ 1.56
GFRA3O60609 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.8■■□□□ 1.56
GFRA3O60609 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
GFRA3O60609 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.8■■□□□ 1.56
GFRA3O60609 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.8■■□□□ 1.56
GFRA3O60609 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
GFRA3O60609 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
GFRA3O60609 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
GFRA3O60609 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.79■■□□□ 1.56
GFRA3O60609 AC110285.6-201ENST00000617652 491 ntBASIC24.79■■□□□ 1.56
GFRA3O60609 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
GFRA3O60609 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
GFRA3O60609 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
GFRA3O60609 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
GFRA3O60609 AL359258.2-201ENST00000564063 1566 ntBASIC24.77■■□□□ 1.56
GFRA3O60609 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
GFRA3O60609 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.77■■□□□ 1.56
GFRA3O60609 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.77■■□□□ 1.56
GFRA3O60609 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
GFRA3O60609 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
GFRA3O60609 AL136116.3-201ENST00000402907 1138 ntBASIC24.76■■□□□ 1.55
GFRA3O60609 AC131281.2-201ENST00000520478 145 ntBASIC24.76■■□□□ 1.55
GFRA3O60609 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.76■■□□□ 1.55
GFRA3O60609 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
GFRA3O60609 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
GFRA3O60609 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
GFRA3O60609 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
GFRA3O60609 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
GFRA3O60609 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.75■■□□□ 1.55
GFRA3O60609 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
GFRA3O60609 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.75■■□□□ 1.55
GFRA3O60609 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
GFRA3O60609 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
GFRA3O60609 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
GFRA3O60609 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.74■■□□□ 1.55
GFRA3O60609 BX664725.1-201ENST00000438252 379 ntBASIC24.74■■□□□ 1.55
GFRA3O60609 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
GFRA3O60609 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
GFRA3O60609 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
GFRA3O60609 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.73■■□□□ 1.55
GFRA3O60609 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.73■■□□□ 1.55
GFRA3O60609 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.73■■□□□ 1.55
GFRA3O60609 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.73■■□□□ 1.55
GFRA3O60609 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
GFRA3O60609 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
GFRA3O60609 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.72■■□□□ 1.55
GFRA3O60609 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.72■■□□□ 1.55
GFRA3O60609 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.72■■□□□ 1.55
GFRA3O60609 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
GFRA3O60609 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
GFRA3O60609 AC019171.1-201ENST00000601251 1056 ntBASIC24.71■■□□□ 1.55
GFRA3O60609 MIR5787-201ENST00000611784 55 ntBASIC24.71■■□□□ 1.55
GFRA3O60609 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
GFRA3O60609 AC026271.2-201ENST00000428091 497 ntBASIC24.7■■□□□ 1.54
GFRA3O60609 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.7■■□□□ 1.54
GFRA3O60609 MIR3960-201ENST00000583311 91 ntBASIC24.7■■□□□ 1.54
GFRA3O60609 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
GFRA3O60609 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
GFRA3O60609 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
GFRA3O60609 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
GFRA3O60609 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.69■■□□□ 1.54
GFRA3O60609 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.69■■□□□ 1.54
GFRA3O60609 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
GFRA3O60609 ZNRF2P3-201ENST00000424200 374 ntBASIC24.69■■□□□ 1.54
GFRA3O60609 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
GFRA3O60609 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.69■■□□□ 1.54
GFRA3O60609 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.69■■□□□ 1.54
GFRA3O60609 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.69■■□□□ 1.54
GFRA3O60609 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
GFRA3O60609 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
GFRA3O60609 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
GFRA3O60609 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.68■■□□□ 1.54
GFRA3O60609 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.68■■□□□ 1.54
GFRA3O60609 AC096631.2-201ENST00000436136 790 ntBASIC24.67■■□□□ 1.54
GFRA3O60609 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
GFRA3O60609 AL161658.1-201ENST00000623641 1967 ntBASIC24.67■■□□□ 1.54
GFRA3O60609 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
GFRA3O60609 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
GFRA3O60609 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
GFRA3O60609 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.66■■□□□ 1.54
GFRA3O60609 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
GFRA3O60609 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
GFRA3O60609 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
GFRA3O60609 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC24.66■■□□□ 1.54
GFRA3O60609 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.66■■□□□ 1.54
GFRA3O60609 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
GFRA3O60609 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.65■■□□□ 1.54
GFRA3O60609 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.65■■□□□ 1.54
GFRA3O60609 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.65■■□□□ 1.54
GFRA3O60609 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC24.65■■□□□ 1.54
GFRA3O60609 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.65■■□□□ 1.54
GFRA3O60609 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
GFRA3O60609 TSPY9P-201ENST00000440215 945 ntBASIC24.64■■□□□ 1.54
GFRA3O60609 TSPY11P-201ENST00000442607 1045 ntBASIC24.64■■□□□ 1.54
GFRA3O60609 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
GFRA3O60609 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.63■■□□□ 1.53
GFRA3O60609 AC133561.4-201ENST00000566112 224 ntBASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms