Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CR559946.2-201ENST00000623684 991 ntBASIC21.43■■□□□ 1.02
XRCC2O43543 MIR219A2-201ENST00000608502 1504 ntBASIC21.43■■□□□ 1.02
XRCC2O43543 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.43■■□□□ 1.02
XRCC2O43543 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
XRCC2O43543 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
XRCC2O43543 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.42■■□□□ 1.02
XRCC2O43543 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
XRCC2O43543 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
XRCC2O43543 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.41■■□□□ 1.02
XRCC2O43543 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
XRCC2O43543 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.41■■□□□ 1.02
XRCC2O43543 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.41■■□□□ 1.02
XRCC2O43543 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
XRCC2O43543 AP004609.3-201ENST00000610705 1884 ntBASIC21.41■■□□□ 1.02
XRCC2O43543 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
XRCC2O43543 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
XRCC2O43543 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
XRCC2O43543 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
XRCC2O43543 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
XRCC2O43543 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
XRCC2O43543 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
XRCC2O43543 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
XRCC2O43543 MIR3648-2-201ENST00000581792 180 ntBASIC21.4■■□□□ 1.02
XRCC2O43543 MIR3648-1-201ENST00000615959 180 ntBASIC21.4■■□□□ 1.02
XRCC2O43543 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
XRCC2O43543 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.39■■□□□ 1.02
XRCC2O43543 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
XRCC2O43543 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
XRCC2O43543 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
XRCC2O43543 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
XRCC2O43543 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
XRCC2O43543 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
XRCC2O43543 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
XRCC2O43543 AC142472.1-201ENST00000612013 1741 ntBASIC21.38■■□□□ 1.01
XRCC2O43543 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
XRCC2O43543 HLA-V-202ENST00000446817 847 ntBASIC21.38■■□□□ 1.01
XRCC2O43543 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
XRCC2O43543 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.38■■□□□ 1.01
XRCC2O43543 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.38■■□□□ 1.01
XRCC2O43543 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
XRCC2O43543 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
XRCC2O43543 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
XRCC2O43543 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
XRCC2O43543 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
XRCC2O43543 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
XRCC2O43543 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.35■■□□□ 1.01
XRCC2O43543 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
XRCC2O43543 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
XRCC2O43543 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC2O43543 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC2O43543 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.34■■□□□ 1.01
XRCC2O43543 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
XRCC2O43543 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC2O43543 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
XRCC2O43543 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
XRCC2O43543 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC2O43543 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
XRCC2O43543 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC2O43543 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
XRCC2O43543 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
XRCC2O43543 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
XRCC2O43543 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.33■■□□□ 1.01
XRCC2O43543 AC016575.1-201ENST00000607026 382 ntBASIC21.33■■□□□ 1.01
XRCC2O43543 MIR7108-201ENST00000614319 87 ntBASIC21.33■■□□□ 1.01
XRCC2O43543 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.33■■□□□ 1
XRCC2O43543 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.33■■□□□ 1
XRCC2O43543 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.33■■□□□ 1
XRCC2O43543 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.32■■□□□ 1
XRCC2O43543 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.32■■□□□ 1
XRCC2O43543 AC135731.1-201ENST00000569415 2548 ntBASIC21.32■■□□□ 1
XRCC2O43543 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
XRCC2O43543 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.32■■□□□ 1
XRCC2O43543 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.31■■□□□ 1
XRCC2O43543 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
XRCC2O43543 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.31■■□□□ 1
XRCC2O43543 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.31■■□□□ 1
XRCC2O43543 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.3■■□□□ 1
XRCC2O43543 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
XRCC2O43543 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.3■■□□□ 1
XRCC2O43543 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
XRCC2O43543 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
XRCC2O43543 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.3■■□□□ 1
XRCC2O43543 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.3■■□□□ 1
XRCC2O43543 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
XRCC2O43543 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
XRCC2O43543 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.29■■□□□ 1
XRCC2O43543 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
XRCC2O43543 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
XRCC2O43543 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
XRCC2O43543 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.28■■□□□ 1
XRCC2O43543 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
XRCC2O43543 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.28■■□□□ 1
XRCC2O43543 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.28■■□□□ 1
XRCC2O43543 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.28■■□□□ 1
XRCC2O43543 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
XRCC2O43543 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.28■■□□□ 1
XRCC2O43543 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
XRCC2O43543 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
XRCC2O43543 AC126177.7-201ENST00000547904 679 ntBASIC21.27■■□□□ 1
XRCC2O43543 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms