Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC35.44■■■■□ 3.26
CHD2O14647 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC35.43■■■■□ 3.26
CHD2O14647 YBX1P4-201ENST00000392794 808 ntBASIC35.43■■■■□ 3.26
CHD2O14647 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
CHD2O14647 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
CHD2O14647 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
CHD2O14647 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC35.43■■■■□ 3.26
CHD2O14647 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC35.43■■■■□ 3.26
CHD2O14647 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC35.43■■■■□ 3.26
CHD2O14647 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC35.42■■■■□ 3.26
CHD2O14647 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC35.42■■■■□ 3.26
CHD2O14647 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CHD2O14647 PRTG-204ENST00000561292 833 ntTSL 3 BASIC35.41■■■■□ 3.26
CHD2O14647 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
CHD2O14647 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC35.41■■■■□ 3.26
CHD2O14647 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
CHD2O14647 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC35.41■■■■□ 3.26
CHD2O14647 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
CHD2O14647 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CHD2O14647 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC35.39■■■■□ 3.26
CHD2O14647 MIR3960-201ENST00000583311 91 ntBASIC35.39■■■■□ 3.26
CHD2O14647 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CHD2O14647 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC35.39■■■■□ 3.26
CHD2O14647 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC35.38■■■■□ 3.25
CHD2O14647 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
CHD2O14647 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC35.37■■■■□ 3.25
CHD2O14647 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC35.37■■■■□ 3.25
CHD2O14647 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC35.37■■■■□ 3.25
CHD2O14647 IDNK-203ENST00000405990 629 ntTSL 2 BASIC35.36■■■■□ 3.25
CHD2O14647 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
CHD2O14647 AC100797.4-201ENST00000631653 1827 ntBASIC35.36■■■■□ 3.25
CHD2O14647 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC35.35■■■■□ 3.25
CHD2O14647 IDNK-201ENST00000376417 511 ntTSL 5 BASIC35.35■■■■□ 3.25
CHD2O14647 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
CHD2O14647 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC35.35■■■■□ 3.25
CHD2O14647 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC35.35■■■■□ 3.25
CHD2O14647 AL356441.2-201ENST00000443009 864 ntBASIC35.34■■■■□ 3.25
CHD2O14647 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
CHD2O14647 AP004833.2-201ENST00000532228 1454 ntBASIC35.34■■■■□ 3.25
CHD2O14647 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC35.34■■■■□ 3.25
CHD2O14647 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC35.33■■■■□ 3.25
CHD2O14647 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC35.33■■■■□ 3.25
CHD2O14647 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC35.32■■■■□ 3.24
CHD2O14647 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC35.31■■■■□ 3.24
CHD2O14647 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC35.31■■■■□ 3.24
CHD2O14647 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC35.3■■■■□ 3.24
CHD2O14647 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC35.3■■■■□ 3.24
CHD2O14647 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC35.3■■■■□ 3.24
CHD2O14647 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC35.29■■■■□ 3.24
CHD2O14647 LSM7-203ENST00000585409 512 ntTSL 2 BASIC35.28■■■■□ 3.24
CHD2O14647 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CHD2O14647 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CHD2O14647 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CHD2O14647 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC35.26■■■■□ 3.24
CHD2O14647 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC35.26■■■■□ 3.24
CHD2O14647 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
CHD2O14647 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC35.25■■■■□ 3.23
CHD2O14647 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
CHD2O14647 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC35.24■■■■□ 3.23
CHD2O14647 AL031848.2-201ENST00000607670 837 ntBASIC35.23■■■■□ 3.23
CHD2O14647 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC35.23■■■■□ 3.23
CHD2O14647 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC35.22■■■■□ 3.23
CHD2O14647 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
CHD2O14647 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
CHD2O14647 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CHD2O14647 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC35.21■■■■□ 3.23
CHD2O14647 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC35.21■■■■□ 3.23
CHD2O14647 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
CHD2O14647 MTX2-204ENST00000443241 799 ntTSL 3 BASIC35.21■■■■□ 3.23
CHD2O14647 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC35.21■■■■□ 3.23
CHD2O14647 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC35.2■■■■□ 3.23
CHD2O14647 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC35.2■■■■□ 3.23
CHD2O14647 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
CHD2O14647 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC35.19■■■■□ 3.22
CHD2O14647 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC35.19■■■■□ 3.22
CHD2O14647 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC35.19■■■■□ 3.22
CHD2O14647 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
CHD2O14647 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
CHD2O14647 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC35.18■■■■□ 3.22
CHD2O14647 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC35.18■■■■□ 3.22
CHD2O14647 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
CHD2O14647 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC35.18■■■■□ 3.22
CHD2O14647 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
CHD2O14647 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC35.17■■■■□ 3.22
CHD2O14647 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
CHD2O14647 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC35.17■■■■□ 3.22
CHD2O14647 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CHD2O14647 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC35.16■■■■□ 3.22
CHD2O14647 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC35.16■■■■□ 3.22
CHD2O14647 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
CHD2O14647 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
CHD2O14647 MIR935-201ENST00000401179 91 ntBASIC35.15■■■■□ 3.22
CHD2O14647 RNF146-205ENST00000477776 762 ntTSL 3 BASIC35.14■■■■□ 3.22
CHD2O14647 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC35.14■■■■□ 3.22
CHD2O14647 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC35.14■■■■□ 3.22
CHD2O14647 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC35.13■■■■□ 3.21
CHD2O14647 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
CHD2O14647 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC35.13■■■■□ 3.21
CHD2O14647 Z92544.1-202ENST00000571933 1220 ntBASIC35.13■■■■□ 3.21
CHD2O14647 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC35.12■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms