Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SOCS3O14543 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SOCS3O14543 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOCS3O14543 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SOCS3O14543 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.63■□□□□ 0.57
SOCS3O14543 AC148477.6-201ENST00000623746 465 ntBASIC18.63■□□□□ 0.57
SOCS3O14543 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOCS3O14543 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOCS3O14543 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOCS3O14543 ABHD17AP4-201ENST00000411545 909 ntBASIC18.62■□□□□ 0.57
SOCS3O14543 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.62■□□□□ 0.57
SOCS3O14543 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOCS3O14543 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SOCS3O14543 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.62■□□□□ 0.57
SOCS3O14543 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SOCS3O14543 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SOCS3O14543 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.62■□□□□ 0.57
SOCS3O14543 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.62■□□□□ 0.57
SOCS3O14543 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOCS3O14543 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOCS3O14543 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SOCS3O14543 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.61■□□□□ 0.57
SOCS3O14543 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.61■□□□□ 0.57
SOCS3O14543 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOCS3O14543 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SOCS3O14543 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.6■□□□□ 0.57
SOCS3O14543 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOCS3O14543 MIR219A2-201ENST00000608502 1504 ntBASIC18.6■□□□□ 0.57
SOCS3O14543 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SOCS3O14543 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOCS3O14543 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOCS3O14543 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.6■□□□□ 0.57
SOCS3O14543 CR559946.2-201ENST00000623684 991 ntBASIC18.6■□□□□ 0.57
SOCS3O14543 AC091060.1-201ENST00000623524 1766 ntBASIC18.6■□□□□ 0.57
SOCS3O14543 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SOCS3O14543 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.6■□□□□ 0.57
SOCS3O14543 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SOCS3O14543 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SOCS3O14543 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.59■□□□□ 0.57
SOCS3O14543 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.59■□□□□ 0.57
SOCS3O14543 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.59■□□□□ 0.57
SOCS3O14543 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOCS3O14543 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SOCS3O14543 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.58■□□□□ 0.57
SOCS3O14543 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SOCS3O14543 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SOCS3O14543 HLA-V-202ENST00000446817 847 ntBASIC18.58■□□□□ 0.56
SOCS3O14543 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SOCS3O14543 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SOCS3O14543 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SOCS3O14543 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.57■□□□□ 0.56
SOCS3O14543 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SOCS3O14543 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SOCS3O14543 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.57■□□□□ 0.56
SOCS3O14543 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.57■□□□□ 0.56
SOCS3O14543 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.57■□□□□ 0.56
SOCS3O14543 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SOCS3O14543 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SOCS3O14543 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SOCS3O14543 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SOCS3O14543 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SOCS3O14543 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.56■□□□□ 0.56
SOCS3O14543 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SOCS3O14543 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SOCS3O14543 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOCS3O14543 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SOCS3O14543 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SOCS3O14543 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SOCS3O14543 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.55■□□□□ 0.56
SOCS3O14543 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SOCS3O14543 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.54■□□□□ 0.56
SOCS3O14543 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOCS3O14543 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
SOCS3O14543 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOCS3O14543 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SOCS3O14543 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SOCS3O14543 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.54■□□□□ 0.56
SOCS3O14543 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SOCS3O14543 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SOCS3O14543 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOCS3O14543 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.53■□□□□ 0.56
SOCS3O14543 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.53■□□□□ 0.56
SOCS3O14543 MIR3648-2-201ENST00000581792 180 ntBASIC18.53■□□□□ 0.56
SOCS3O14543 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SOCS3O14543 MIR3648-1-201ENST00000615959 180 ntBASIC18.53■□□□□ 0.56
SOCS3O14543 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOCS3O14543 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SOCS3O14543 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SOCS3O14543 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.52■□□□□ 0.56
SOCS3O14543 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SOCS3O14543 AC145676.1-201ENST00000514988 2004 ntBASIC18.52■□□□□ 0.55
SOCS3O14543 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SOCS3O14543 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOCS3O14543 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SOCS3O14543 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.51■□□□□ 0.55
SOCS3O14543 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.51■□□□□ 0.55
SOCS3O14543 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOCS3O14543 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SOCS3O14543 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SOCS3O14543 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms