Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.1■■□□□ 1.13
CCL21O00585 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCL21O00585 AC009299.2-201ENST00000482477 511 ntBASIC22.1■■□□□ 1.13
CCL21O00585 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.1■■□□□ 1.13
CCL21O00585 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CCL21O00585 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.1■■□□□ 1.13
CCL21O00585 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCL21O00585 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCL21O00585 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.09■■□□□ 1.13
CCL21O00585 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCL21O00585 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC22.08■■□□□ 1.13
CCL21O00585 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCL21O00585 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.08■■□□□ 1.13
CCL21O00585 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
CCL21O00585 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCL21O00585 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCL21O00585 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
CCL21O00585 AL592295.1-201ENST00000400984 884 ntBASIC22.07■■□□□ 1.12
CCL21O00585 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.07■■□□□ 1.12
CCL21O00585 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCL21O00585 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.07■■□□□ 1.12
CCL21O00585 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCL21O00585 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCL21O00585 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCL21O00585 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCL21O00585 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CCL21O00585 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCL21O00585 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCL21O00585 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCL21O00585 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CCL21O00585 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCL21O00585 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCL21O00585 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCL21O00585 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.05■■□□□ 1.12
CCL21O00585 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCL21O00585 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCL21O00585 AC103834.1-201ENST00000520383 144 ntBASIC22.04■■□□□ 1.12
CCL21O00585 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CCL21O00585 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCL21O00585 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCL21O00585 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCL21O00585 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCL21O00585 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.03■■□□□ 1.12
CCL21O00585 AC131212.1-201ENST00000613771 668 ntBASIC22.03■■□□□ 1.12
CCL21O00585 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCL21O00585 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCL21O00585 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCL21O00585 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.02■■□□□ 1.12
CCL21O00585 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC22.02■■□□□ 1.12
CCL21O00585 PVT1_1.1-201ENST00000615125 194 ntBASIC22.02■■□□□ 1.12
CCL21O00585 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCL21O00585 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC22.02■■□□□ 1.12
CCL21O00585 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CCL21O00585 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CCL21O00585 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.01■■□□□ 1.11
CCL21O00585 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCL21O00585 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CCL21O00585 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.01■■□□□ 1.11
CCL21O00585 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCL21O00585 ABCB10P3-201ENST00000561950 2166 ntBASIC22.01■■□□□ 1.11
CCL21O00585 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCL21O00585 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22■■□□□ 1.11
CCL21O00585 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22■■□□□ 1.11
CCL21O00585 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22■■□□□ 1.11
CCL21O00585 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCL21O00585 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.99■■□□□ 1.11
CCL21O00585 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCL21O00585 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCL21O00585 AP002414.2-202ENST00000590929 1450 ntBASIC21.98■■□□□ 1.11
CCL21O00585 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCL21O00585 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
CCL21O00585 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.98■■□□□ 1.11
CCL21O00585 MIR4508-201ENST00000584178 70 ntBASIC21.98■■□□□ 1.11
CCL21O00585 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCL21O00585 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCL21O00585 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.97■■□□□ 1.11
CCL21O00585 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.97■■□□□ 1.11
CCL21O00585 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CCL21O00585 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCL21O00585 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CCL21O00585 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCL21O00585 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCL21O00585 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL21O00585 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL21O00585 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL21O00585 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.95■■□□□ 1.1
CCL21O00585 THA1P-201ENST00000590384 1145 ntBASIC21.95■■□□□ 1.1
CCL21O00585 AL139393.2-201ENST00000608721 2025 ntBASIC21.95■■□□□ 1.1
CCL21O00585 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL21O00585 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL21O00585 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCL21O00585 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCL21O00585 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.94■■□□□ 1.1
CCL21O00585 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
CCL21O00585 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCL21O00585 GUSBP5-201ENST00000418136 578 ntBASIC21.94■■□□□ 1.1
CCL21O00585 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
CCL21O00585 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CCL21O00585 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCL21O00585 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms