Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHL1O00533 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
CHL1O00533 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.23■■■□□ 2.75
CHL1O00533 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
CHL1O00533 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CHL1O00533 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CHL1O00533 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CHL1O00533 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CHL1O00533 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CHL1O00533 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CHL1O00533 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC32.21■■■□□ 2.75
CHL1O00533 ABHD17AP5-201ENST00000580133 923 ntBASIC32.21■■■□□ 2.75
CHL1O00533 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.21■■■□□ 2.75
CHL1O00533 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC32.21■■■□□ 2.75
CHL1O00533 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
CHL1O00533 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CHL1O00533 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC32.19■■■□□ 2.74
CHL1O00533 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC32.19■■■□□ 2.74
CHL1O00533 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
CHL1O00533 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
CHL1O00533 AC025884.2-201ENST00000553429 711 ntBASIC32.18■■■□□ 2.74
CHL1O00533 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CHL1O00533 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC32.17■■■□□ 2.74
CHL1O00533 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC32.17■■■□□ 2.74
CHL1O00533 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
CHL1O00533 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CHL1O00533 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
CHL1O00533 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC32.14■■■□□ 2.74
CHL1O00533 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CHL1O00533 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.14■■■□□ 2.74
CHL1O00533 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
CHL1O00533 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.14■■■□□ 2.74
CHL1O00533 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CHL1O00533 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC32.13■■■□□ 2.73
CHL1O00533 SMPD5-203ENST00000639008 1464 ntBASIC32.13■■■□□ 2.73
CHL1O00533 AL449106.1-201ENST00000608517 1980 ntBASIC32.12■■■□□ 2.73
CHL1O00533 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CHL1O00533 AC007029.1-201ENST00000604183 313 ntBASIC32.1■■■□□ 2.73
CHL1O00533 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CHL1O00533 AL359504.2-201ENST00000605506 1601 ntBASIC32.09■■■□□ 2.73
CHL1O00533 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CHL1O00533 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CHL1O00533 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CHL1O00533 SHF-208ENST00000560734 1731 ntTSL 3 BASIC32.08■■■□□ 2.73
CHL1O00533 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CHL1O00533 HYI-213ENST00000583037 1322 ntTSL 5 BASIC32.07■■■□□ 2.72
CHL1O00533 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC32.07■■■□□ 2.72
CHL1O00533 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.07■■■□□ 2.72
CHL1O00533 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC32.07■■■□□ 2.72
CHL1O00533 U85056.1-201ENST00000616429 682 ntBASIC32.07■■■□□ 2.72
CHL1O00533 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
CHL1O00533 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.06■■■□□ 2.72
CHL1O00533 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CHL1O00533 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC32.06■■■□□ 2.72
CHL1O00533 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CHL1O00533 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC32.06■■■□□ 2.72
CHL1O00533 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC32.06■■■□□ 2.72
CHL1O00533 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CHL1O00533 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC32.06■■■□□ 2.72
CHL1O00533 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CHL1O00533 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CHL1O00533 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC32.04■■■□□ 2.72
CHL1O00533 NTF6A-201ENST00000591175 560 ntBASIC32.04■■■□□ 2.72
CHL1O00533 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.04■■■□□ 2.72
CHL1O00533 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CHL1O00533 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
CHL1O00533 PFN2-211ENST00000489155 636 ntTSL 4 BASIC32.02■■■□□ 2.72
CHL1O00533 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.02■■■□□ 2.72
CHL1O00533 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CHL1O00533 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC32.01■■■□□ 2.72
CHL1O00533 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
CHL1O00533 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CHL1O00533 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CHL1O00533 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
CHL1O00533 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC32■■■□□ 2.71
CHL1O00533 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
CHL1O00533 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
CHL1O00533 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CHL1O00533 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
CHL1O00533 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.98■■■□□ 2.71
CHL1O00533 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.98■■■□□ 2.71
CHL1O00533 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
CHL1O00533 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
CHL1O00533 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
CHL1O00533 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CHL1O00533 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.97■■■□□ 2.71
CHL1O00533 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.97■■■□□ 2.71
CHL1O00533 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHL1O00533 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHL1O00533 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.96■■■□□ 2.71
CHL1O00533 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.96■■■□□ 2.71
CHL1O00533 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.96■■■□□ 2.71
CHL1O00533 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
CHL1O00533 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CHL1O00533 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.95■■■□□ 2.71
CHL1O00533 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
CHL1O00533 RP9P-202ENST00000450133 1212 ntBASIC31.95■■■□□ 2.71
CHL1O00533 AC026202.3-201ENST00000600805 1127 ntBASIC31.95■■■□□ 2.71
CHL1O00533 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
CHL1O00533 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.95■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms