Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
LRRC53A6NM62 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
LRRC53A6NM62 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.62■■□□□ 1.85
LRRC53A6NM62 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.62■■□□□ 1.85
LRRC53A6NM62 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
LRRC53A6NM62 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LRRC53A6NM62 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LRRC53A6NM62 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LRRC53A6NM62 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LRRC53A6NM62 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
LRRC53A6NM62 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.61■■□□□ 1.85
LRRC53A6NM62 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.61■■□□□ 1.85
LRRC53A6NM62 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LRRC53A6NM62 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
LRRC53A6NM62 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
LRRC53A6NM62 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
LRRC53A6NM62 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LRRC53A6NM62 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.6■■□□□ 1.85
LRRC53A6NM62 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LRRC53A6NM62 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
LRRC53A6NM62 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.6■■□□□ 1.85
LRRC53A6NM62 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.6■■□□□ 1.85
LRRC53A6NM62 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LRRC53A6NM62 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
LRRC53A6NM62 AC020928.2-201ENST00000588717 2197 ntBASIC26.59■■□□□ 1.85
LRRC53A6NM62 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
LRRC53A6NM62 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.59■■□□□ 1.85
LRRC53A6NM62 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
LRRC53A6NM62 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
LRRC53A6NM62 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.58■■□□□ 1.85
LRRC53A6NM62 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LRRC53A6NM62 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
LRRC53A6NM62 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.58■■□□□ 1.85
LRRC53A6NM62 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
LRRC53A6NM62 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
LRRC53A6NM62 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
LRRC53A6NM62 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.57■■□□□ 1.84
LRRC53A6NM62 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
LRRC53A6NM62 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
LRRC53A6NM62 LINC01971-201ENST00000617888 1048 ntBASIC26.57■■□□□ 1.84
LRRC53A6NM62 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
LRRC53A6NM62 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
LRRC53A6NM62 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.56■■□□□ 1.84
LRRC53A6NM62 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC53A6NM62 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC53A6NM62 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC53A6NM62 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
LRRC53A6NM62 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC53A6NM62 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC53A6NM62 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC26.56■■□□□ 1.84
LRRC53A6NM62 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC26.56■■□□□ 1.84
LRRC53A6NM62 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
LRRC53A6NM62 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
LRRC53A6NM62 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRRC53A6NM62 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
LRRC53A6NM62 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
LRRC53A6NM62 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
LRRC53A6NM62 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LRRC53A6NM62 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
LRRC53A6NM62 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
LRRC53A6NM62 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRRC53A6NM62 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.53■■□□□ 1.84
LRRC53A6NM62 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRRC53A6NM62 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
LRRC53A6NM62 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
LRRC53A6NM62 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
LRRC53A6NM62 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.53■■□□□ 1.84
LRRC53A6NM62 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.52■■□□□ 1.84
LRRC53A6NM62 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
LRRC53A6NM62 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.52■■□□□ 1.84
LRRC53A6NM62 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.52■■□□□ 1.84
LRRC53A6NM62 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LRRC53A6NM62 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.52■■□□□ 1.84
LRRC53A6NM62 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
LRRC53A6NM62 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
LRRC53A6NM62 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
LRRC53A6NM62 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRRC53A6NM62 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRRC53A6NM62 DUX4L13-201ENST00000554103 1267 ntBASIC26.5■■□□□ 1.83
LRRC53A6NM62 DUX4L15-201ENST00000611059 1267 ntBASIC26.5■■□□□ 1.83
LRRC53A6NM62 DUX4L23-201ENST00000615195 1269 ntBASIC26.5■■□□□ 1.83
LRRC53A6NM62 DUX4L24-201ENST00000617576 1269 ntBASIC26.5■■□□□ 1.83
LRRC53A6NM62 DUX4L22-201ENST00000618238 1269 ntBASIC26.5■■□□□ 1.83
LRRC53A6NM62 DUX4L20-201ENST00000619712 1269 ntBASIC26.5■■□□□ 1.83
LRRC53A6NM62 DUX4L21-201ENST00000622058 1269 ntBASIC26.5■■□□□ 1.83
LRRC53A6NM62 DUX4L10-201ENST00000622460 1267 ntBASIC26.5■■□□□ 1.83
LRRC53A6NM62 DUX4L25-201ENST00000624915 1269 ntBASIC26.5■■□□□ 1.83
LRRC53A6NM62 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
LRRC53A6NM62 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
LRRC53A6NM62 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
LRRC53A6NM62 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
LRRC53A6NM62 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
LRRC53A6NM62 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
LRRC53A6NM62 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
LRRC53A6NM62 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
LRRC53A6NM62 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.48■■□□□ 1.83
LRRC53A6NM62 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.48■■□□□ 1.83
LRRC53A6NM62 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.48■■□□□ 1.83
LRRC53A6NM62 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.48■■□□□ 1.83
LRRC53A6NM62 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms