Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMIM35A0A1B0GVV1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
SMIM35A0A1B0GVV1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.4■■□□□ 1.98
SMIM35A0A1B0GVV1 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.4■■□□□ 1.98
SMIM35A0A1B0GVV1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.4■■□□□ 1.98
SMIM35A0A1B0GVV1 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SMIM35A0A1B0GVV1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SMIM35A0A1B0GVV1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC27.39■■□□□ 1.98
SMIM35A0A1B0GVV1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SMIM35A0A1B0GVV1 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
SMIM35A0A1B0GVV1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
SMIM35A0A1B0GVV1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
SMIM35A0A1B0GVV1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
SMIM35A0A1B0GVV1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMIM35A0A1B0GVV1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMIM35A0A1B0GVV1 AC093536.1-201ENST00000569153 554 ntBASIC27.38■■□□□ 1.97
SMIM35A0A1B0GVV1 MIR3960-201ENST00000583311 91 ntBASIC27.38■■□□□ 1.97
SMIM35A0A1B0GVV1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC27.38■■□□□ 1.97
SMIM35A0A1B0GVV1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SMIM35A0A1B0GVV1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMIM35A0A1B0GVV1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SMIM35A0A1B0GVV1 RAP2CP1-202ENST00000605179 643 ntBASIC27.37■■□□□ 1.97
SMIM35A0A1B0GVV1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
SMIM35A0A1B0GVV1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
SMIM35A0A1B0GVV1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC27.36■■□□□ 1.97
SMIM35A0A1B0GVV1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMIM35A0A1B0GVV1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SMIM35A0A1B0GVV1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
SMIM35A0A1B0GVV1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.36■■□□□ 1.97
SMIM35A0A1B0GVV1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.35■■□□□ 1.97
SMIM35A0A1B0GVV1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
SMIM35A0A1B0GVV1 WHAMMP3-201ENST00000611636 1609 ntBASIC27.34■■□□□ 1.97
SMIM35A0A1B0GVV1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
SMIM35A0A1B0GVV1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
SMIM35A0A1B0GVV1 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
SMIM35A0A1B0GVV1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
SMIM35A0A1B0GVV1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SMIM35A0A1B0GVV1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
SMIM35A0A1B0GVV1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
SMIM35A0A1B0GVV1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
SMIM35A0A1B0GVV1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SMIM35A0A1B0GVV1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
SMIM35A0A1B0GVV1 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SMIM35A0A1B0GVV1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SMIM35A0A1B0GVV1 AL359504.2-201ENST00000605506 1601 ntBASIC27.31■■□□□ 1.96
SMIM35A0A1B0GVV1 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SMIM35A0A1B0GVV1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.3■■□□□ 1.96
SMIM35A0A1B0GVV1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
SMIM35A0A1B0GVV1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC27.3■■□□□ 1.96
SMIM35A0A1B0GVV1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC27.3■■□□□ 1.96
SMIM35A0A1B0GVV1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC27.3■■□□□ 1.96
SMIM35A0A1B0GVV1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC27.29■■□□□ 1.96
SMIM35A0A1B0GVV1 DUX4L18-201ENST00000553347 1267 ntBASIC27.29■■□□□ 1.96
SMIM35A0A1B0GVV1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC27.29■■□□□ 1.96
SMIM35A0A1B0GVV1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
SMIM35A0A1B0GVV1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SMIM35A0A1B0GVV1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC27.29■■□□□ 1.96
SMIM35A0A1B0GVV1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.28■■□□□ 1.96
SMIM35A0A1B0GVV1 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.27■■□□□ 1.96
SMIM35A0A1B0GVV1 DRD5P2-201ENST00000421395 2012 ntBASIC27.27■■□□□ 1.96
SMIM35A0A1B0GVV1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SMIM35A0A1B0GVV1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
SMIM35A0A1B0GVV1 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC27.26■■□□□ 1.95
SMIM35A0A1B0GVV1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SMIM35A0A1B0GVV1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMIM35A0A1B0GVV1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMIM35A0A1B0GVV1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SMIM35A0A1B0GVV1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC27.25■■□□□ 1.95
SMIM35A0A1B0GVV1 DUX4L9-201ENST00000449051 1259 ntBASIC27.25■■□□□ 1.95
SMIM35A0A1B0GVV1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.25■■□□□ 1.95
SMIM35A0A1B0GVV1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.25■■□□□ 1.95
SMIM35A0A1B0GVV1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.25■■□□□ 1.95
SMIM35A0A1B0GVV1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.25■■□□□ 1.95
SMIM35A0A1B0GVV1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMIM35A0A1B0GVV1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SMIM35A0A1B0GVV1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.24■■□□□ 1.95
SMIM35A0A1B0GVV1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SMIM35A0A1B0GVV1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.24■■□□□ 1.95
SMIM35A0A1B0GVV1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC27.24■■□□□ 1.95
SMIM35A0A1B0GVV1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC27.23■■□□□ 1.95
SMIM35A0A1B0GVV1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SMIM35A0A1B0GVV1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
SMIM35A0A1B0GVV1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SMIM35A0A1B0GVV1 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SMIM35A0A1B0GVV1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.22■■□□□ 1.95
SMIM35A0A1B0GVV1 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SMIM35A0A1B0GVV1 AC139426.1-201ENST00000568218 2529 ntBASIC27.22■■□□□ 1.95
SMIM35A0A1B0GVV1 SPCS2P3-201ENST00000500401 656 ntBASIC27.22■■□□□ 1.95
SMIM35A0A1B0GVV1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
SMIM35A0A1B0GVV1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SMIM35A0A1B0GVV1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SMIM35A0A1B0GVV1 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SMIM35A0A1B0GVV1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.21■■□□□ 1.95
SMIM35A0A1B0GVV1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SMIM35A0A1B0GVV1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SMIM35A0A1B0GVV1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.21■■□□□ 1.95
SMIM35A0A1B0GVV1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.95
SMIM35A0A1B0GVV1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SMIM35A0A1B0GVV1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.2■■□□□ 1.94
SMIM35A0A1B0GVV1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms