Protein–RNA interactions for Protein: A0A1B0GVH6

C13orf42, Chromosome 13 open reading frame 42, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C13orf42A0A1B0GVH6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
C13orf42A0A1B0GVH6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.67■□□□□ 0.9
C13orf42A0A1B0GVH6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
C13orf42A0A1B0GVH6 MIR3665-201ENST00000578708 105 ntBASIC20.67■□□□□ 0.9
C13orf42A0A1B0GVH6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
C13orf42A0A1B0GVH6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.66■□□□□ 0.9
C13orf42A0A1B0GVH6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
C13orf42A0A1B0GVH6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.66■□□□□ 0.9
C13orf42A0A1B0GVH6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
C13orf42A0A1B0GVH6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C13orf42A0A1B0GVH6 AC092803.2-201ENST00000564287 1899 ntBASIC20.65■□□□□ 0.9
C13orf42A0A1B0GVH6 DUSP8P4-201ENST00000399538 1761 ntBASIC20.65■□□□□ 0.9
C13orf42A0A1B0GVH6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C13orf42A0A1B0GVH6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
C13orf42A0A1B0GVH6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
C13orf42A0A1B0GVH6 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
C13orf42A0A1B0GVH6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
C13orf42A0A1B0GVH6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.64■□□□□ 0.89
C13orf42A0A1B0GVH6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C13orf42A0A1B0GVH6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.63■□□□□ 0.89
C13orf42A0A1B0GVH6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.63■□□□□ 0.89
C13orf42A0A1B0GVH6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C13orf42A0A1B0GVH6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C13orf42A0A1B0GVH6 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C13orf42A0A1B0GVH6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C13orf42A0A1B0GVH6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C13orf42A0A1B0GVH6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
C13orf42A0A1B0GVH6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C13orf42A0A1B0GVH6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
C13orf42A0A1B0GVH6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
C13orf42A0A1B0GVH6 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.61■□□□□ 0.89
C13orf42A0A1B0GVH6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.61■□□□□ 0.89
C13orf42A0A1B0GVH6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
C13orf42A0A1B0GVH6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C13orf42A0A1B0GVH6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
C13orf42A0A1B0GVH6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
C13orf42A0A1B0GVH6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
C13orf42A0A1B0GVH6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
C13orf42A0A1B0GVH6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
C13orf42A0A1B0GVH6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.58■□□□□ 0.89
C13orf42A0A1B0GVH6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
C13orf42A0A1B0GVH6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
C13orf42A0A1B0GVH6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 DUX4L28-201ENST00000623687 678 ntBASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C13orf42A0A1B0GVH6 AL162393.1-201ENST00000437852 946 ntBASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
C13orf42A0A1B0GVH6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C13orf42A0A1B0GVH6 AC018358.1-201ENST00000631079 1402 ntBASIC20.55■□□□□ 0.88
C13orf42A0A1B0GVH6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.55■□□□□ 0.88
C13orf42A0A1B0GVH6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C13orf42A0A1B0GVH6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
C13orf42A0A1B0GVH6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
C13orf42A0A1B0GVH6 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
C13orf42A0A1B0GVH6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C13orf42A0A1B0GVH6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C13orf42A0A1B0GVH6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
C13orf42A0A1B0GVH6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
C13orf42A0A1B0GVH6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
C13orf42A0A1B0GVH6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
C13orf42A0A1B0GVH6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C13orf42A0A1B0GVH6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
C13orf42A0A1B0GVH6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C13orf42A0A1B0GVH6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.52■□□□□ 0.88
C13orf42A0A1B0GVH6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
C13orf42A0A1B0GVH6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
C13orf42A0A1B0GVH6 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
C13orf42A0A1B0GVH6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C13orf42A0A1B0GVH6 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
C13orf42A0A1B0GVH6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms