Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.88■□□□□ 0.45
IGHV4-28A0A0C4DH34 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.87■□□□□ 0.45
IGHV4-28A0A0C4DH34 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.87■□□□□ 0.45
IGHV4-28A0A0C4DH34 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IGHV4-28A0A0C4DH34 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
IGHV4-28A0A0C4DH34 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IGHV4-28A0A0C4DH34 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.86■□□□□ 0.45
IGHV4-28A0A0C4DH34 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IGHV4-28A0A0C4DH34 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGHV4-28A0A0C4DH34 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
IGHV4-28A0A0C4DH34 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGHV4-28A0A0C4DH34 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IGHV4-28A0A0C4DH34 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGHV4-28A0A0C4DH34 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGHV4-28A0A0C4DH34 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGHV4-28A0A0C4DH34 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.85■□□□□ 0.45
IGHV4-28A0A0C4DH34 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
IGHV4-28A0A0C4DH34 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
IGHV4-28A0A0C4DH34 LINC01003-201ENST00000564834 1764 ntBASIC17.85■□□□□ 0.45
IGHV4-28A0A0C4DH34 WHAMMP3-201ENST00000611636 1609 ntBASIC17.85■□□□□ 0.45
IGHV4-28A0A0C4DH34 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV4-28A0A0C4DH34 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV4-28A0A0C4DH34 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
IGHV4-28A0A0C4DH34 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.84■□□□□ 0.45
IGHV4-28A0A0C4DH34 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
IGHV4-28A0A0C4DH34 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
IGHV4-28A0A0C4DH34 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IGHV4-28A0A0C4DH34 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
IGHV4-28A0A0C4DH34 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
IGHV4-28A0A0C4DH34 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
IGHV4-28A0A0C4DH34 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
IGHV4-28A0A0C4DH34 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.83■□□□□ 0.44
IGHV4-28A0A0C4DH34 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.82■□□□□ 0.44
IGHV4-28A0A0C4DH34 AC142086.6-201ENST00000621154 1765 ntBASIC17.82■□□□□ 0.44
IGHV4-28A0A0C4DH34 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV4-28A0A0C4DH34 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
IGHV4-28A0A0C4DH34 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGHV4-28A0A0C4DH34 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV4-28A0A0C4DH34 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.81■□□□□ 0.44
IGHV4-28A0A0C4DH34 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV4-28A0A0C4DH34 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.81■□□□□ 0.44
IGHV4-28A0A0C4DH34 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV4-28A0A0C4DH34 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.81■□□□□ 0.44
IGHV4-28A0A0C4DH34 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
IGHV4-28A0A0C4DH34 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV4-28A0A0C4DH34 SMPD5-203ENST00000639008 1464 ntBASIC17.81■□□□□ 0.44
IGHV4-28A0A0C4DH34 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV4-28A0A0C4DH34 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
IGHV4-28A0A0C4DH34 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
IGHV4-28A0A0C4DH34 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGHV4-28A0A0C4DH34 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGHV4-28A0A0C4DH34 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.79■□□□□ 0.44
IGHV4-28A0A0C4DH34 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGHV4-28A0A0C4DH34 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGHV4-28A0A0C4DH34 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.79■□□□□ 0.44
IGHV4-28A0A0C4DH34 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.79■□□□□ 0.44
IGHV4-28A0A0C4DH34 NTF6A-201ENST00000591175 560 ntBASIC17.79■□□□□ 0.44
IGHV4-28A0A0C4DH34 AC007029.1-201ENST00000604183 313 ntBASIC17.79■□□□□ 0.44
IGHV4-28A0A0C4DH34 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IGHV4-28A0A0C4DH34 BX255925.1-201ENST00000566954 1854 ntBASIC17.79■□□□□ 0.44
IGHV4-28A0A0C4DH34 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGHV4-28A0A0C4DH34 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IGHV4-28A0A0C4DH34 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
IGHV4-28A0A0C4DH34 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.78■□□□□ 0.44
IGHV4-28A0A0C4DH34 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
IGHV4-28A0A0C4DH34 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.78■□□□□ 0.44
IGHV4-28A0A0C4DH34 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
IGHV4-28A0A0C4DH34 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.78■□□□□ 0.44
IGHV4-28A0A0C4DH34 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
IGHV4-28A0A0C4DH34 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.78■□□□□ 0.44
IGHV4-28A0A0C4DH34 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.78■□□□□ 0.44
IGHV4-28A0A0C4DH34 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.77■□□□□ 0.44
IGHV4-28A0A0C4DH34 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
IGHV4-28A0A0C4DH34 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.77■□□□□ 0.44
IGHV4-28A0A0C4DH34 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
IGHV4-28A0A0C4DH34 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.77■□□□□ 0.43
IGHV4-28A0A0C4DH34 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
IGHV4-28A0A0C4DH34 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
IGHV4-28A0A0C4DH34 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IGHV4-28A0A0C4DH34 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC17.76■□□□□ 0.43
IGHV4-28A0A0C4DH34 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
IGHV4-28A0A0C4DH34 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.76■□□□□ 0.43
IGHV4-28A0A0C4DH34 U85056.1-201ENST00000616429 682 ntBASIC17.76■□□□□ 0.43
IGHV4-28A0A0C4DH34 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.76■□□□□ 0.43
IGHV4-28A0A0C4DH34 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV4-28A0A0C4DH34 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
IGHV4-28A0A0C4DH34 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.75■□□□□ 0.43
IGHV4-28A0A0C4DH34 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
IGHV4-28A0A0C4DH34 AC025884.2-201ENST00000553429 711 ntBASIC17.75■□□□□ 0.43
IGHV4-28A0A0C4DH34 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
IGHV4-28A0A0C4DH34 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV4-28A0A0C4DH34 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
IGHV4-28A0A0C4DH34 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV4-28A0A0C4DH34 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV4-28A0A0C4DH34 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV4-28A0A0C4DH34 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IGHV4-28A0A0C4DH34 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV4-28A0A0C4DH34 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV4-28A0A0C4DH34 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV4-28A0A0C4DH34 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms