Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRGV4A0A0C4DH28 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TRGV4A0A0C4DH28 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRGV4A0A0C4DH28 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.64■□□□□ 0.41
TRGV4A0A0C4DH28 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TRGV4A0A0C4DH28 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.63■□□□□ 0.41
TRGV4A0A0C4DH28 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV4A0A0C4DH28 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.63■□□□□ 0.41
TRGV4A0A0C4DH28 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.63■□□□□ 0.41
TRGV4A0A0C4DH28 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.63■□□□□ 0.41
TRGV4A0A0C4DH28 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRGV4A0A0C4DH28 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV4A0A0C4DH28 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV4A0A0C4DH28 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV4A0A0C4DH28 MIR7108-201ENST00000614319 87 ntBASIC17.62■□□□□ 0.41
TRGV4A0A0C4DH28 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRGV4A0A0C4DH28 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.62■□□□□ 0.41
TRGV4A0A0C4DH28 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV4A0A0C4DH28 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.62■□□□□ 0.41
TRGV4A0A0C4DH28 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.62■□□□□ 0.41
TRGV4A0A0C4DH28 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRGV4A0A0C4DH28 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV4A0A0C4DH28 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRGV4A0A0C4DH28 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV4A0A0C4DH28 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV4A0A0C4DH28 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV4A0A0C4DH28 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRGV4A0A0C4DH28 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRGV4A0A0C4DH28 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRGV4A0A0C4DH28 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRGV4A0A0C4DH28 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
TRGV4A0A0C4DH28 CR559946.2-201ENST00000623684 991 ntBASIC17.6■□□□□ 0.41
TRGV4A0A0C4DH28 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRGV4A0A0C4DH28 WHAMMP3-201ENST00000611636 1609 ntBASIC17.6■□□□□ 0.41
TRGV4A0A0C4DH28 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.6■□□□□ 0.41
TRGV4A0A0C4DH28 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV4A0A0C4DH28 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV4A0A0C4DH28 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
TRGV4A0A0C4DH28 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TRGV4A0A0C4DH28 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRGV4A0A0C4DH28 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.59■□□□□ 0.41
TRGV4A0A0C4DH28 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.59■□□□□ 0.41
TRGV4A0A0C4DH28 MIR3648-2-201ENST00000581792 180 ntBASIC17.59■□□□□ 0.41
TRGV4A0A0C4DH28 MIR3648-1-201ENST00000615959 180 ntBASIC17.59■□□□□ 0.41
TRGV4A0A0C4DH28 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.59■□□□□ 0.41
TRGV4A0A0C4DH28 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRGV4A0A0C4DH28 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.58■□□□□ 0.41
TRGV4A0A0C4DH28 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRGV4A0A0C4DH28 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRGV4A0A0C4DH28 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRGV4A0A0C4DH28 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.58■□□□□ 0.4
TRGV4A0A0C4DH28 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TRGV4A0A0C4DH28 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.58■□□□□ 0.4
TRGV4A0A0C4DH28 MIR219A2-201ENST00000608502 1504 ntBASIC17.57■□□□□ 0.4
TRGV4A0A0C4DH28 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV4A0A0C4DH28 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
TRGV4A0A0C4DH28 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV4A0A0C4DH28 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.57■□□□□ 0.4
TRGV4A0A0C4DH28 AC016575.1-201ENST00000607026 382 ntBASIC17.57■□□□□ 0.4
TRGV4A0A0C4DH28 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV4A0A0C4DH28 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.57■□□□□ 0.4
TRGV4A0A0C4DH28 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV4A0A0C4DH28 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRGV4A0A0C4DH28 AL449106.1-201ENST00000608517 1980 ntBASIC17.57■□□□□ 0.4
TRGV4A0A0C4DH28 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRGV4A0A0C4DH28 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRGV4A0A0C4DH28 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.56■□□□□ 0.4
TRGV4A0A0C4DH28 AC148477.6-201ENST00000623746 465 ntBASIC17.56■□□□□ 0.4
TRGV4A0A0C4DH28 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.56■□□□□ 0.4
TRGV4A0A0C4DH28 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV4A0A0C4DH28 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV4A0A0C4DH28 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.55■□□□□ 0.4
TRGV4A0A0C4DH28 HLA-V-202ENST00000446817 847 ntBASIC17.55■□□□□ 0.4
TRGV4A0A0C4DH28 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV4A0A0C4DH28 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRGV4A0A0C4DH28 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV4A0A0C4DH28 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV4A0A0C4DH28 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV4A0A0C4DH28 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV4A0A0C4DH28 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV4A0A0C4DH28 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV4A0A0C4DH28 AP004609.3-201ENST00000610705 1884 ntBASIC17.54■□□□□ 0.4
TRGV4A0A0C4DH28 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRGV4A0A0C4DH28 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRGV4A0A0C4DH28 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRGV4A0A0C4DH28 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV4A0A0C4DH28 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV4A0A0C4DH28 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.53■□□□□ 0.4
TRGV4A0A0C4DH28 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRGV4A0A0C4DH28 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRGV4A0A0C4DH28 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRGV4A0A0C4DH28 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRGV4A0A0C4DH28 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRGV4A0A0C4DH28 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRGV4A0A0C4DH28 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRGV4A0A0C4DH28 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.52■□□□□ 0.4
TRGV4A0A0C4DH28 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.52■□□□□ 0.4
TRGV4A0A0C4DH28 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
TRGV4A0A0C4DH28 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRGV4A0A0C4DH28 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms