Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TRAV8-1A0A0A6YYK1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV8-1A0A0A6YYK1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV8-1A0A0A6YYK1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRAV8-1A0A0A6YYK1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.68■□□□□ 0.58
TRAV8-1A0A0A6YYK1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV8-1A0A0A6YYK1 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV8-1A0A0A6YYK1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV8-1A0A0A6YYK1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV8-1A0A0A6YYK1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV8-1A0A0A6YYK1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRAV8-1A0A0A6YYK1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV8-1A0A0A6YYK1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV8-1A0A0A6YYK1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV8-1A0A0A6YYK1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV8-1A0A0A6YYK1 AC093323.1-202ENST00000635031 2045 ntBASIC18.66■□□□□ 0.58
TRAV8-1A0A0A6YYK1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV8-1A0A0A6YYK1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV8-1A0A0A6YYK1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV8-1A0A0A6YYK1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV8-1A0A0A6YYK1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV8-1A0A0A6YYK1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV8-1A0A0A6YYK1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV8-1A0A0A6YYK1 SUZ12P1-203ENST00000578195 985 ntBASIC18.65■□□□□ 0.58
TRAV8-1A0A0A6YYK1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV8-1A0A0A6YYK1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
TRAV8-1A0A0A6YYK1 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.64■□□□□ 0.58
TRAV8-1A0A0A6YYK1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.64■□□□□ 0.57
TRAV8-1A0A0A6YYK1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-1A0A0A6YYK1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-1A0A0A6YYK1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-1A0A0A6YYK1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-1A0A0A6YYK1 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV8-1A0A0A6YYK1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV8-1A0A0A6YYK1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRAV8-1A0A0A6YYK1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV8-1A0A0A6YYK1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV8-1A0A0A6YYK1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV8-1A0A0A6YYK1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV8-1A0A0A6YYK1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV8-1A0A0A6YYK1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV8-1A0A0A6YYK1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV8-1A0A0A6YYK1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV8-1A0A0A6YYK1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV8-1A0A0A6YYK1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV8-1A0A0A6YYK1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV8-1A0A0A6YYK1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV8-1A0A0A6YYK1 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV8-1A0A0A6YYK1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV8-1A0A0A6YYK1 AC142472.1-201ENST00000612013 1741 ntBASIC18.6■□□□□ 0.57
TRAV8-1A0A0A6YYK1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV8-1A0A0A6YYK1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV8-1A0A0A6YYK1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV8-1A0A0A6YYK1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.6■□□□□ 0.57
TRAV8-1A0A0A6YYK1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV8-1A0A0A6YYK1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.59■□□□□ 0.57
TRAV8-1A0A0A6YYK1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV8-1A0A0A6YYK1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV8-1A0A0A6YYK1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV8-1A0A0A6YYK1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TRAV8-1A0A0A6YYK1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV8-1A0A0A6YYK1 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV8-1A0A0A6YYK1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV8-1A0A0A6YYK1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV8-1A0A0A6YYK1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV8-1A0A0A6YYK1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.57■□□□□ 0.56
TRAV8-1A0A0A6YYK1 DUX4L28-201ENST00000623687 678 ntBASIC18.57■□□□□ 0.56
TRAV8-1A0A0A6YYK1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV8-1A0A0A6YYK1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV8-1A0A0A6YYK1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV8-1A0A0A6YYK1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV8-1A0A0A6YYK1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV8-1A0A0A6YYK1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV8-1A0A0A6YYK1 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV8-1A0A0A6YYK1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV8-1A0A0A6YYK1 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.55■□□□□ 0.56
TRAV8-1A0A0A6YYK1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRAV8-1A0A0A6YYK1 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRAV8-1A0A0A6YYK1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV8-1A0A0A6YYK1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV8-1A0A0A6YYK1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.54■□□□□ 0.56
TRAV8-1A0A0A6YYK1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV8-1A0A0A6YYK1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV8-1A0A0A6YYK1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRAV8-1A0A0A6YYK1 AC110285.7-201ENST00000624417 1536 ntBASIC18.54■□□□□ 0.56
TRAV8-1A0A0A6YYK1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV8-1A0A0A6YYK1 WHAMMP3-201ENST00000611636 1609 ntBASIC18.53■□□□□ 0.56
TRAV8-1A0A0A6YYK1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV8-1A0A0A6YYK1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV8-1A0A0A6YYK1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV8-1A0A0A6YYK1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV8-1A0A0A6YYK1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV8-1A0A0A6YYK1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV8-1A0A0A6YYK1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV8-1A0A0A6YYK1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV8-1A0A0A6YYK1 ERN1-208ENST00000606895 2068 ntBASIC18.53■□□□□ 0.56
TRAV8-1A0A0A6YYK1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV8-1A0A0A6YYK1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV8-1A0A0A6YYK1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV8-1A0A0A6YYK1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms