Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV9-1A0A075B6T8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
TRAV9-1A0A075B6T8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRAV9-1A0A075B6T8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV9-1A0A075B6T8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TRAV9-1A0A075B6T8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV9-1A0A075B6T8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV9-1A0A075B6T8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV9-1A0A075B6T8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV9-1A0A075B6T8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV9-1A0A075B6T8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRAV9-1A0A075B6T8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV9-1A0A075B6T8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
TRAV9-1A0A075B6T8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV9-1A0A075B6T8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV9-1A0A075B6T8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV9-1A0A075B6T8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV9-1A0A075B6T8 AC068473.5-201ENST00000616428 2072 ntBASIC18.61■□□□□ 0.57
TRAV9-1A0A075B6T8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV9-1A0A075B6T8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV9-1A0A075B6T8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV9-1A0A075B6T8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRAV9-1A0A075B6T8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV9-1A0A075B6T8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.6■□□□□ 0.57
TRAV9-1A0A075B6T8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV9-1A0A075B6T8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRAV9-1A0A075B6T8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TRAV9-1A0A075B6T8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV9-1A0A075B6T8 AC127502.1-201ENST00000399971 1502 ntBASIC18.59■□□□□ 0.57
TRAV9-1A0A075B6T8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV9-1A0A075B6T8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV9-1A0A075B6T8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV9-1A0A075B6T8 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV9-1A0A075B6T8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRAV9-1A0A075B6T8 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV9-1A0A075B6T8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV9-1A0A075B6T8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV9-1A0A075B6T8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV9-1A0A075B6T8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV9-1A0A075B6T8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.56■□□□□ 0.56
TRAV9-1A0A075B6T8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV9-1A0A075B6T8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV9-1A0A075B6T8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV9-1A0A075B6T8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV9-1A0A075B6T8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV9-1A0A075B6T8 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV9-1A0A075B6T8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV9-1A0A075B6T8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV9-1A0A075B6T8 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV9-1A0A075B6T8 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC18.54■□□□□ 0.56
TRAV9-1A0A075B6T8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV9-1A0A075B6T8 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV9-1A0A075B6T8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV9-1A0A075B6T8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV9-1A0A075B6T8 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV9-1A0A075B6T8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV9-1A0A075B6T8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV9-1A0A075B6T8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
TRAV9-1A0A075B6T8 AP004609.3-201ENST00000610705 1884 ntBASIC18.53■□□□□ 0.56
TRAV9-1A0A075B6T8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV9-1A0A075B6T8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV9-1A0A075B6T8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRAV9-1A0A075B6T8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV9-1A0A075B6T8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV9-1A0A075B6T8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV9-1A0A075B6T8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV9-1A0A075B6T8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV9-1A0A075B6T8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV9-1A0A075B6T8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.52■□□□□ 0.55
TRAV9-1A0A075B6T8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
TRAV9-1A0A075B6T8 WHAMMP3-201ENST00000611636 1609 ntBASIC18.52■□□□□ 0.55
TRAV9-1A0A075B6T8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV9-1A0A075B6T8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRAV9-1A0A075B6T8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV9-1A0A075B6T8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV9-1A0A075B6T8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRAV9-1A0A075B6T8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV9-1A0A075B6T8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV9-1A0A075B6T8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV9-1A0A075B6T8 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.5■□□□□ 0.55
TRAV9-1A0A075B6T8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV9-1A0A075B6T8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV9-1A0A075B6T8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
TRAV9-1A0A075B6T8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV9-1A0A075B6T8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
TRAV9-1A0A075B6T8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV9-1A0A075B6T8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV9-1A0A075B6T8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRAV9-1A0A075B6T8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV9-1A0A075B6T8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV9-1A0A075B6T8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV9-1A0A075B6T8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV9-1A0A075B6T8 AC138932.3-201ENST00000567634 1902 ntBASIC18.49■□□□□ 0.55
TRAV9-1A0A075B6T8 CLDN5-201ENST00000403084 2357 ntBASIC18.48■□□□□ 0.55
TRAV9-1A0A075B6T8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV9-1A0A075B6T8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV9-1A0A075B6T8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TRAV9-1A0A075B6T8 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV9-1A0A075B6T8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV9-1A0A075B6T8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms