Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 SLC7A5P1-201ENST00000568957 537 ntBASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.76□□□□□ -0.21
TRAPPC1Q9Y5R8 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 AL138688.1-201ENST00000624851 1594 ntBASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRAPPC1Q9Y5R8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 AL603756.1-201ENST00000606511 2163 ntBASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 AC012414.1-201ENST00000556676 535 ntBASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 AC104187.1-201ENST00000607510 612 ntBASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAPPC1Q9Y5R8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms