Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGB3Q9Y5G1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 KRT18P57-201ENST00000443599 1254 ntBASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 AC009065.1-201ENST00000564055 1225 ntBASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 WWOX-216ENST00000569818 525 ntBASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 AL445228.2-201ENST00000605589 952 ntBASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGB3Q9Y5G1 HOXB1-202ENST00000577092 1414 ntBASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 DUX4L26-201ENST00000489078 1255 ntBASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 KRT18P35-201ENST00000510488 1269 ntBASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 LINC01238-205ENST00000567549 1107 ntBASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB3Q9Y5G1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGB3Q9Y5G1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
PCDHGB3Q9Y5G1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 AL138966.2-201ENST00000621997 464 ntBASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms