Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 COL9A3-202ENST00000452372 596 ntTSL 530.55■■■□□ 2.482e-6■■□□□ 11.9
DROSHAQ9NRR4 FTCD-210ENST00000488577 447 ntTSL 329.89■■■□□ 2.376e-7■■□□□ 11.9
DROSHAQ9NRR4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.499e-7■■□□□ 11.9
DROSHAQ9NRR4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.399e-7■■□□□ 11.9
DROSHAQ9NRR4 YWHAZ-215ENST00000518736 883 ntTSL 329.22■■■□□ 2.279e-7■■□□□ 11.9
DROSHAQ9NRR4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC27.78■■■□□ 2.049e-7■■□□□ 11.9
DROSHAQ9NRR4 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC16.98■□□□□ 0.319e-7■■□□□ 11.9
DROSHAQ9NRR4 YWHAZ-212ENST00000480304 2247 ntTSL 214.67□□□□□ -0.069e-7■■□□□ 11.9
DROSHAQ9NRR4 FOXK2-202ENST00000473637 3462 ntTSL 1 (best)28.64■■■□□ 2.181e-6■■□□□ 11.9
DROSHAQ9NRR4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.571e-6■■□□□ 11.9
DROSHAQ9NRR4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC27.18■■□□□ 1.943e-7■■□□□ 11.9
DROSHAQ9NRR4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.966e-7■■□□□ 11.9
DROSHAQ9NRR4 PSME4-208ENST00000481518 886 ntTSL 535.41■■■■□ 3.264e-14■■□□□ 11.9
DROSHAQ9NRR4 PSME4-201ENST00000389993 6581 ntTSL 1 (best)17.71■□□□□ 0.434e-14■■□□□ 11.9
DROSHAQ9NRR4 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.224e-14■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-205ENST00000393252 482 ntTSL 242.24■■■■■ 4.358e-6■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-211ENST00000433098 1197 ntTSL 541.43■■■■■ 4.228e-6■■□□□ 11.9
DROSHAQ9NRR4 SFT2D2-203ENST00000471981 666 ntTSL 538.76■■■■□ 3.88e-6■■□□□ 11.9
DROSHAQ9NRR4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC38.65■■■■□ 3.788e-6■■□□□ 11.9
DROSHAQ9NRR4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.758e-6■■□□□ 11.9
DROSHAQ9NRR4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC36.69■■■■□ 3.468e-6■■□□□ 11.9
DROSHAQ9NRR4 H2AFY-211ENST00000507868 861 ntTSL 236.69■■■■□ 3.468e-6■■□□□ 11.9
DROSHAQ9NRR4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC36.61■■■■□ 3.458e-6■■□□□ 11.9
DROSHAQ9NRR4 VPS37B-203ENST00000535765 879 ntTSL 336.04■■■■□ 3.368e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-211ENST00000619337 545 ntTSL 435.78■■■■□ 3.328e-6■■□□□ 11.9
DROSHAQ9NRR4 CRACR2B-204ENST00000527089 824 ntTSL 335.5■■■■□ 3.278e-6■■□□□ 11.9
DROSHAQ9NRR4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC35.44■■■■□ 3.268e-6■■□□□ 11.9
DROSHAQ9NRR4 CRACR2B-214ENST00000534606 627 ntTSL 335.44■■■■□ 3.268e-6■■□□□ 11.9
DROSHAQ9NRR4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC34.95■■■■□ 3.198e-6■■□□□ 11.9
DROSHAQ9NRR4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.068e-6■■□□□ 11.9
DROSHAQ9NRR4 CSRNP2-203ENST00000548206 685 ntTSL 334.18■■■■□ 3.068e-6■■□□□ 11.9
DROSHAQ9NRR4 CSRNP2-204ENST00000548981 845 ntTSL 333.89■■■■□ 3.028e-6■■□□□ 11.9
DROSHAQ9NRR4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC33.85■■■■□ 3.011e-11■■□□□ 11.9
DROSHAQ9NRR4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC33.4■■■□□ 2.948e-6■■□□□ 11.9
DROSHAQ9NRR4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC33.38■■■□□ 2.938e-6■■□□□ 11.9
DROSHAQ9NRR4 RPL22-204ENST00000465387 508 ntTSL 233.37■■■□□ 2.938e-6■■□□□ 11.9
DROSHAQ9NRR4 CSRNP2-202ENST00000546935 681 ntTSL 533.37■■■□□ 2.938e-6■■□□□ 11.9
DROSHAQ9NRR4 PAN3-204ENST00000503791 2443 ntTSL 233.12■■■□□ 2.898e-6■■□□□ 11.9
DROSHAQ9NRR4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC32.86■■■□□ 2.858e-6■■□□□ 11.9
DROSHAQ9NRR4 AC073111.5-205ENST00000641717 521 ntBASIC32.8■■■□□ 2.848e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-207ENST00000613853 563 ntTSL 432.64■■■□□ 2.828e-6■■□□□ 11.9
DROSHAQ9NRR4 CSRNP2-207ENST00000552680 576 ntTSL 432.49■■■□□ 2.798e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-206ENST00000612880 593 ntTSL 231.85■■■□□ 2.698e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-204ENST00000522282 445 ntTSL 331.85■■■□□ 2.698e-6■■□□□ 11.9
DROSHAQ9NRR4 CCDC88B-208ENST00000492980 2118 ntTSL 531.28■■■□□ 2.68e-6■■□□□ 11.9
DROSHAQ9NRR4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC30.98■■■□□ 2.558e-6■■□□□ 11.9
DROSHAQ9NRR4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.528e-6■■□□□ 11.9
DROSHAQ9NRR4 RPL22-206ENST00000480661 2279 ntTSL 1 (best)30.44■■■□□ 2.468e-6■■□□□ 11.9
DROSHAQ9NRR4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC30■■■□□ 2.398e-6■■□□□ 11.9
DROSHAQ9NRR4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC29.61■■■□□ 2.338e-6■■□□□ 11.9
DROSHAQ9NRR4 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.331e-11■■□□□ 11.9
DROSHAQ9NRR4 CSRNP2-205ENST00000550461 580 ntTSL 529.51■■■□□ 2.318e-6■■□□□ 11.9
DROSHAQ9NRR4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC29.32■■■□□ 2.288e-6■■□□□ 11.9
DROSHAQ9NRR4 ACTL6A-212ENST00000490364 459 ntTSL 329.27■■■□□ 2.288e-6■■□□□ 11.9
DROSHAQ9NRR4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC29.2■■■□□ 2.268e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC29.11■■■□□ 2.258e-6■■□□□ 11.9
DROSHAQ9NRR4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC28.89■■■□□ 2.228e-6■■□□□ 11.9
DROSHAQ9NRR4 AC073111.5-203ENST00000641234 559 nt28.65■■■□□ 2.188e-6■■□□□ 11.9
DROSHAQ9NRR4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.178e-6■■□□□ 11.9
DROSHAQ9NRR4 CRACR2B-206ENST00000528315 575 ntTSL 328.62■■■□□ 2.178e-6■■□□□ 11.9
DROSHAQ9NRR4 CRACR2B-209ENST00000530183 530 ntTSL 528.62■■■□□ 2.178e-6■■□□□ 11.9
DROSHAQ9NRR4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.131e-11■■□□□ 11.9
DROSHAQ9NRR4 H2AFY-210ENST00000506671 1905 ntTSL 528.21■■■□□ 2.118e-6■■□□□ 11.9
DROSHAQ9NRR4 LZTR1-214ENST00000492480 695 ntTSL 328.13■■■□□ 2.098e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC27.84■■■□□ 2.058e-6■■□□□ 11.9
DROSHAQ9NRR4 KIF22-206ENST00000565736 1568 ntTSL 227.79■■■□□ 2.048e-6■■□□□ 11.9
DROSHAQ9NRR4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC27.72■■■□□ 2.038e-6■■□□□ 11.9
DROSHAQ9NRR4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.988e-6■■□□□ 11.9
DROSHAQ9NRR4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC27.34■■□□□ 1.978e-6■■□□□ 11.9
DROSHAQ9NRR4 ARVCF-208ENST00000480792 551 ntTSL 326.99■■□□□ 1.918e-6■■□□□ 11.9
DROSHAQ9NRR4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.888e-6■■□□□ 11.9
DROSHAQ9NRR4 AC073111.5-207ENST00000642008 571 nt26.54■■□□□ 1.848e-6■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.818e-6■■□□□ 11.9
DROSHAQ9NRR4 SMIM1-202ENST00000452264 447 ntTSL 226.09■■□□□ 1.778e-6■■□□□ 11.9
DROSHAQ9NRR4 KIAA0355-204ENST00000588470 632 ntTSL 525.36■■□□□ 1.658e-6■■□□□ 11.9
DROSHAQ9NRR4 U2AF2-207ENST00000592867 447 ntTSL 225.25■■□□□ 1.638e-6■■□□□ 11.9
DROSHAQ9NRR4 KIAA0355-206ENST00000589583 582 ntTSL 325.12■■□□□ 1.618e-6■■□□□ 11.9
DROSHAQ9NRR4 CRACR2B-212ENST00000533803 742 ntTSL 224.93■■□□□ 1.588e-6■■□□□ 11.9
DROSHAQ9NRR4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC24.5■■□□□ 1.518e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.518e-6■■□□□ 11.9
DROSHAQ9NRR4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC24.42■■□□□ 1.58e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-203ENST00000519428 676 ntTSL 224.19■■□□□ 1.468e-6■■□□□ 11.9
DROSHAQ9NRR4 CRACR2B-213ENST00000534191 1154 ntTSL 224.16■■□□□ 1.468e-6■■□□□ 11.9
DROSHAQ9NRR4 MRPL58-204ENST00000584208 593 ntTSL 323.88■■□□□ 1.418e-6■■□□□ 11.9
DROSHAQ9NRR4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.418e-6■■□□□ 11.9
DROSHAQ9NRR4 ACTL6A-207ENST00000468767 622 ntTSL 323.73■■□□□ 1.398e-6■■□□□ 11.9
DROSHAQ9NRR4 ACTL6A-213ENST00000491202 597 ntTSL 223.73■■□□□ 1.398e-6■■□□□ 11.9
DROSHAQ9NRR4 AC093525.8-201ENST00000624099 1342 ntBASIC23.69■■□□□ 1.388e-6■■□□□ 11.9
DROSHAQ9NRR4 CCDC88B-210ENST00000494566 2909 ntTSL 223.67■■□□□ 1.388e-6■■□□□ 11.9
DROSHAQ9NRR4 U2AF2-205ENST00000588850 637 ntTSL 223.39■■□□□ 1.338e-6■■□□□ 11.9
DROSHAQ9NRR4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC23.18■■□□□ 1.38e-6■■□□□ 11.9
DROSHAQ9NRR4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.38e-6■■□□□ 11.9
DROSHAQ9NRR4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC23.01■■□□□ 1.278e-6■■□□□ 11.9
DROSHAQ9NRR4 U2AF2-203ENST00000587196 778 ntTSL 322.28■■□□□ 1.168e-6■■□□□ 11.9
DROSHAQ9NRR4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC21.66■■□□□ 1.068e-6■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-210ENST00000432179 572 ntTSL 421.61■■□□□ 1.058e-6■■□□□ 11.9
DROSHAQ9NRR4 H2AFY-203ENST00000360597 1772 ntTSL 521.54■■□□□ 1.048e-6■■□□□ 11.9
DROSHAQ9NRR4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.028e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC21.41■■□□□ 1.028e-6■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC21.32■■□□□ 18e-6■■□□□ 11.9
Retrieved 100 of 16,331 protein–RNA pairs in 122.1 ms