Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.26■□□□□ 0.19
SPENQ96T58 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPENQ96T58 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.26■□□□□ 0.19
SPENQ96T58 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.26■□□□□ 0.19
SPENQ96T58 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPENQ96T58 AC010460.3-201ENST00000511359 1579 ntBASIC16.26■□□□□ 0.19
SPENQ96T58 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.26■□□□□ 0.19
SPENQ96T58 KRT18P2-201ENST00000447938 1258 ntBASIC16.26■□□□□ 0.19
SPENQ96T58 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPENQ96T58 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPENQ96T58 NKAPP1-205ENST00000585790 367 ntBASIC16.26■□□□□ 0.19
SPENQ96T58 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.26■□□□□ 0.19
SPENQ96T58 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.26■□□□□ 0.19
SPENQ96T58 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPENQ96T58 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPENQ96T58 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
SPENQ96T58 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPENQ96T58 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPENQ96T58 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.26■□□□□ 0.19
SPENQ96T58 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.26■□□□□ 0.19
SPENQ96T58 AC106028.4-201ENST00000614509 607 ntBASIC16.26■□□□□ 0.19
SPENQ96T58 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.26■□□□□ 0.19
SPENQ96T58 AC005332.7-201ENST00000614046 2005 ntBASIC16.26■□□□□ 0.19
SPENQ96T58 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
SPENQ96T58 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.25■□□□□ 0.19
SPENQ96T58 FAM8A3P-201ENST00000427218 844 ntBASIC16.25■□□□□ 0.19
SPENQ96T58 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.25■□□□□ 0.19
SPENQ96T58 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.25■□□□□ 0.19
SPENQ96T58 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.25■□□□□ 0.19
SPENQ96T58 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.25■□□□□ 0.19
SPENQ96T58 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.25■□□□□ 0.19
SPENQ96T58 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.25■□□□□ 0.19
SPENQ96T58 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.25■□□□□ 0.19
SPENQ96T58 HLA-J-202ENST00000469281 1241 ntBASIC16.25■□□□□ 0.19
SPENQ96T58 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.25■□□□□ 0.19
SPENQ96T58 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.25■□□□□ 0.19
SPENQ96T58 AL031432.2-201ENST00000566714 459 ntBASIC16.25■□□□□ 0.19
SPENQ96T58 AL928711.1-201ENST00000570165 459 ntBASIC16.25■□□□□ 0.19
SPENQ96T58 OR7E47P-204ENST00000575924 449 ntBASIC16.25■□□□□ 0.19
SPENQ96T58 AC008735.5-201ENST00000623544 497 ntBASIC16.25■□□□□ 0.19
SPENQ96T58 AP000867.4-201ENST00000641616 219 ntBASIC16.25■□□□□ 0.19
SPENQ96T58 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SPENQ96T58 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.25■□□□□ 0.19
SPENQ96T58 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.25■□□□□ 0.19
SPENQ96T58 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.25■□□□□ 0.19
SPENQ96T58 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.25■□□□□ 0.19
SPENQ96T58 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.25■□□□□ 0.19
SPENQ96T58 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPENQ96T58 AC006504.4-201ENST00000592118 1568 ntBASIC16.24■□□□□ 0.19
SPENQ96T58 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPENQ96T58 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPENQ96T58 AC007967.3-201ENST00000434308 558 ntBASIC16.24■□□□□ 0.19
SPENQ96T58 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.24■□□□□ 0.19
SPENQ96T58 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.24■□□□□ 0.19
SPENQ96T58 AC092865.6-201ENST00000642101 219 ntBASIC16.24■□□□□ 0.19
SPENQ96T58 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.24■□□□□ 0.19
SPENQ96T58 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SPENQ96T58 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPENQ96T58 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPENQ96T58 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.24■□□□□ 0.19
SPENQ96T58 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SPENQ96T58 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPENQ96T58 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.24■□□□□ 0.19
SPENQ96T58 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.24■□□□□ 0.19
SPENQ96T58 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.24■□□□□ 0.19
SPENQ96T58 MTDHP5-201ENST00000598980 586 ntBASIC16.24■□□□□ 0.19
SPENQ96T58 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.24■□□□□ 0.19
SPENQ96T58 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.24■□□□□ 0.19
SPENQ96T58 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPENQ96T58 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SPENQ96T58 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SPENQ96T58 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.24■□□□□ 0.19
SPENQ96T58 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPENQ96T58 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPENQ96T58 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SPENQ96T58 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPENQ96T58 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.24■□□□□ 0.19
SPENQ96T58 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.24■□□□□ 0.19
SPENQ96T58 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.24■□□□□ 0.19
SPENQ96T58 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.23■□□□□ 0.19
SPENQ96T58 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
SPENQ96T58 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.23■□□□□ 0.19
SPENQ96T58 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPENQ96T58 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms