Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMD4Q96H15 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMD4Q96H15 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMD4Q96H15 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TIMD4Q96H15 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMD4Q96H15 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMD4Q96H15 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TIMD4Q96H15 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TIMD4Q96H15 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TIMD4Q96H15 MINOS1P3-201ENST00000457048 203 ntBASIC15.21■□□□□ 0.03
TIMD4Q96H15 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TIMD4Q96H15 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMD4Q96H15 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.21■□□□□ 0.03
TIMD4Q96H15 AC099343.3-201ENST00000605834 2503 ntBASIC15.21■□□□□ 0.03
TIMD4Q96H15 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMD4Q96H15 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TIMD4Q96H15 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
TIMD4Q96H15 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
TIMD4Q96H15 AC233702.3-201ENST00000578656 1387 ntBASIC15.21■□□□□ 0.02
TIMD4Q96H15 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TIMD4Q96H15 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TIMD4Q96H15 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TIMD4Q96H15 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 AC009154.2-201ENST00000621177 724 ntBASIC15.2■□□□□ 0.02
TIMD4Q96H15 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.2■□□□□ 0.02
TIMD4Q96H15 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TIMD4Q96H15 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMD4Q96H15 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMD4Q96H15 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMD4Q96H15 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMD4Q96H15 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMD4Q96H15 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMD4Q96H15 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMD4Q96H15 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TIMD4Q96H15 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 KRT17P6-201ENST00000453795 1220 ntBASIC15.19■□□□□ 0.02
TIMD4Q96H15 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 RN7SL606P-201ENST00000472779 293 ntBASIC15.19■□□□□ 0.02
TIMD4Q96H15 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMD4Q96H15 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TIMD4Q96H15 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TIMD4Q96H15 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms