Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.59■□□□□ 0.25
CNIH3Q8TBE1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CNIH3Q8TBE1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNIH3Q8TBE1 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CNIH3Q8TBE1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.59■□□□□ 0.25
CNIH3Q8TBE1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNIH3Q8TBE1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CNIH3Q8TBE1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 AC097658.1-201ENST00000475555 843 ntBASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 AC004264.1-201ENST00000608354 794 ntBASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 PCDHB19P-201ENST00000570871 2371 ntBASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CNIH3Q8TBE1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 AL109659.2-201ENST00000606809 1674 ntBASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 AP000593.1-201ENST00000393668 712 ntBASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 AC006970.2-201ENST00000450065 779 ntBASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 AC083906.2-201ENST00000511578 360 ntBASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 CICP6-201ENST00000457191 2729 ntBASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.57■□□□□ 0.24
CNIH3Q8TBE1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CNIH3Q8TBE1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms