Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 AC125634.1-201ENST00000438758 1403 ntBASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC60Q8IWA6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 AC135776.1-201ENST00000319817 2481 ntBASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 AL096828.2-201ENST00000567259 1965 ntBASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 LINC01711-201ENST00000598340 967 ntBASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 TP73-AS1-210ENST00000637775 1455 ntBASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCDC60Q8IWA6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 RCN1P2-201ENST00000398357 915 ntBASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 MIR5100-201ENST00000579544 119 ntBASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 AC104692.2-201ENST00000603054 253 ntBASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.08■□□□□ 0.81
CCDC60Q8IWA6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC60Q8IWA6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC60Q8IWA6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC60Q8IWA6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.08■□□□□ 0.8
CCDC60Q8IWA6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.08■□□□□ 0.8
CCDC60Q8IWA6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
CCDC60Q8IWA6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCDC60Q8IWA6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 REXO1L6P-202ENST00000619970 1078 ntBASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCDC60Q8IWA6 AC104581.1-202ENST00000635932 2618 ntBASIC20.06■□□□□ 0.8
CCDC60Q8IWA6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC60Q8IWA6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC60Q8IWA6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC60Q8IWA6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC60Q8IWA6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC60Q8IWA6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms