Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 GNAS-203ENST00000306120 1878 ntBASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP13A4Q4VNC1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
ATP13A4Q4VNC1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ATP13A4Q4VNC1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ATP13A4Q4VNC1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ATP13A4Q4VNC1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ATP13A4Q4VNC1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
ATP13A4Q4VNC1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 AL441883.1-201ENST00000566170 1045 ntBASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.89■□□□□ 0.61
ATP13A4Q4VNC1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 AC100803.2-201ENST00000562459 1963 ntBASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 PVRIG2P-201ENST00000435460 978 ntBASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 AC079602.3-201ENST00000623931 403 ntBASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 AC073912.3-201ENST00000624414 853 ntBASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 AC097493.4-201ENST00000641197 219 ntBASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 LTB4R2-202ENST00000528054 3092 ntBASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 AC006116.8-202ENST00000587620 1550 ntBASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP13A4Q4VNC1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
ATP13A4Q4VNC1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.87■□□□□ 0.61
ATP13A4Q4VNC1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms