Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 HMGA1P5-201ENST00000412453 271 ntBASIC12.01□□□□□ -0.49
SYCNQ0VAF6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 AC093827.2-201ENST00000512654 315 ntBASIC12.01□□□□□ -0.49
SYCNQ0VAF6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 AC104390.1-201ENST00000555663 520 ntBASIC12.01□□□□□ -0.49
SYCNQ0VAF6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 REXO1L9P-201ENST00000604264 2108 ntBASIC12.01□□□□□ -0.49
SYCNQ0VAF6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SYCNQ0VAF6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
SYCNQ0VAF6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12□□□□□ -0.49
SYCNQ0VAF6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12□□□□□ -0.49
SYCNQ0VAF6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 SDHAP2-201ENST00000455183 2001 ntBASIC12□□□□□ -0.49
SYCNQ0VAF6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12□□□□□ -0.49
SYCNQ0VAF6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC12□□□□□ -0.49
SYCNQ0VAF6 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12□□□□□ -0.49
SYCNQ0VAF6 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12□□□□□ -0.49
SYCNQ0VAF6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC12□□□□□ -0.49
SYCNQ0VAF6 AP000523.1-201ENST00000398242 1049 ntBASIC12□□□□□ -0.49
SYCNQ0VAF6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC12□□□□□ -0.49
SYCNQ0VAF6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12□□□□□ -0.49
SYCNQ0VAF6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12□□□□□ -0.49
SYCNQ0VAF6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC12□□□□□ -0.49
SYCNQ0VAF6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12□□□□□ -0.49
SYCNQ0VAF6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC12□□□□□ -0.49
SYCNQ0VAF6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC12□□□□□ -0.49
SYCNQ0VAF6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 AC010947.1-201ENST00000623454 693 ntBASIC12□□□□□ -0.49
SYCNQ0VAF6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC12□□□□□ -0.49
SYCNQ0VAF6 CYP2D8P-201ENST00000433633 1490 ntBASIC12□□□□□ -0.49
SYCNQ0VAF6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12□□□□□ -0.49
SYCNQ0VAF6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SYCNQ0VAF6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC12□□□□□ -0.49
SYCNQ0VAF6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SYCNQ0VAF6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12□□□□□ -0.49
SYCNQ0VAF6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
SYCNQ0VAF6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms