Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.11■□□□□ 0.33
TRA2BP62995 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.11■□□□□ 0.33
TRA2BP62995 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRA2BP62995 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRA2BP62995 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRA2BP62995 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRA2BP62995 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRA2BP62995 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
TRA2BP62995 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRA2BP62995 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRA2BP62995 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TRA2BP62995 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRA2BP62995 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRA2BP62995 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRA2BP62995 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRA2BP62995 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRA2BP62995 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRA2BP62995 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.1■□□□□ 0.33
TRA2BP62995 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
TRA2BP62995 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRA2BP62995 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRA2BP62995 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.1■□□□□ 0.33
TRA2BP62995 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.1■□□□□ 0.33
TRA2BP62995 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.1■□□□□ 0.33
TRA2BP62995 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.1■□□□□ 0.33
TRA2BP62995 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.1■□□□□ 0.33
TRA2BP62995 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.1■□□□□ 0.33
TRA2BP62995 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.1■□□□□ 0.33
TRA2BP62995 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.1■□□□□ 0.33
TRA2BP62995 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRA2BP62995 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.1■□□□□ 0.33
TRA2BP62995 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRA2BP62995 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRA2BP62995 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRA2BP62995 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 LINC00602-201ENST00000629776 2065 ntBASIC17.09■□□□□ 0.33
TRA2BP62995 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRA2BP62995 AC018470.1-201ENST00000624790 3129 ntBASIC17.09■□□□□ 0.33
TRA2BP62995 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.09■□□□□ 0.33
TRA2BP62995 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.09■□□□□ 0.33
TRA2BP62995 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 MIR662-201ENST00000384847 95 ntBASIC17.09■□□□□ 0.33
TRA2BP62995 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.09■□□□□ 0.33
TRA2BP62995 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.09■□□□□ 0.33
TRA2BP62995 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TRA2BP62995 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.09■□□□□ 0.33
TRA2BP62995 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
TRA2BP62995 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.09■□□□□ 0.33
TRA2BP62995 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.09■□□□□ 0.33
TRA2BP62995 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRA2BP62995 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRA2BP62995 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
TRA2BP62995 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRA2BP62995 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.08■□□□□ 0.33
TRA2BP62995 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRA2BP62995 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TRA2BP62995 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.08■□□□□ 0.33
TRA2BP62995 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRA2BP62995 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.08■□□□□ 0.33
TRA2BP62995 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.08■□□□□ 0.33
TRA2BP62995 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms