Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PROM1O43490 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
PROM1O43490 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PROM1O43490 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.22■□□□□ 0.35
PROM1O43490 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PROM1O43490 DUX4L26-201ENST00000489078 1255 ntBASIC17.22■□□□□ 0.35
PROM1O43490 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.22■□□□□ 0.35
PROM1O43490 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.22■□□□□ 0.35
PROM1O43490 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.22■□□□□ 0.35
PROM1O43490 REXO1L9P-201ENST00000604264 2108 ntBASIC17.22■□□□□ 0.35
PROM1O43490 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PROM1O43490 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.22■□□□□ 0.35
PROM1O43490 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 HTR7P1-202ENST00000624664 4411 ntBASIC17.22■□□□□ 0.35
PROM1O43490 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.22■□□□□ 0.35
PROM1O43490 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.22■□□□□ 0.35
PROM1O43490 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.22■□□□□ 0.35
PROM1O43490 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PROM1O43490 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.22■□□□□ 0.35
PROM1O43490 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.21■□□□□ 0.35
PROM1O43490 NOC2LP1-202ENST00000452600 2235 ntBASIC17.21■□□□□ 0.35
PROM1O43490 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PROM1O43490 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.21■□□□□ 0.35
PROM1O43490 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PROM1O43490 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
PROM1O43490 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.21■□□□□ 0.35
PROM1O43490 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.21■□□□□ 0.35
PROM1O43490 FAM8A6P-201ENST00000407496 1135 ntBASIC17.21■□□□□ 0.35
PROM1O43490 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.21■□□□□ 0.35
PROM1O43490 HLA-F-220ENST00000434407 884 ntBASIC17.21■□□□□ 0.35
PROM1O43490 AL359075.1-203ENST00000462729 1002 ntBASIC17.21■□□□□ 0.35
PROM1O43490 AC092597.1-201ENST00000487352 616 ntBASIC17.21■□□□□ 0.35
PROM1O43490 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.21■□□□□ 0.35
PROM1O43490 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.21■□□□□ 0.35
PROM1O43490 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.21■□□□□ 0.35
PROM1O43490 AC008687.5-201ENST00000593746 558 ntBASIC17.21■□□□□ 0.35
PROM1O43490 AL136038.4-201ENST00000603606 1261 ntBASIC17.21■□□□□ 0.35
PROM1O43490 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PROM1O43490 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PROM1O43490 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.21■□□□□ 0.35
PROM1O43490 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PROM1O43490 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PROM1O43490 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PROM1O43490 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PROM1O43490 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
PROM1O43490 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PROM1O43490 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PROM1O43490 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PROM1O43490 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.2■□□□□ 0.34
PROM1O43490 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.2■□□□□ 0.34
PROM1O43490 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PROM1O43490 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.2■□□□□ 0.34
PROM1O43490 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.2■□□□□ 0.34
PROM1O43490 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.2■□□□□ 0.34
PROM1O43490 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.2■□□□□ 0.34
PROM1O43490 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.2■□□□□ 0.34
PROM1O43490 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PROM1O43490 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PROM1O43490 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.2■□□□□ 0.34
PROM1O43490 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms