Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH17O14917 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDH17O14917 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH17O14917 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
PCDH17O14917 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH17O14917 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDH17O14917 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDH17O14917 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDH17O14917 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDH17O14917 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDH17O14917 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH17O14917 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PCDH17O14917 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
PCDH17O14917 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH17O14917 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDH17O14917 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.32■□□□□ 0.36
PCDH17O14917 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.32■□□□□ 0.36
PCDH17O14917 KRT126P-201ENST00000549467 1181 ntBASIC17.32■□□□□ 0.36
PCDH17O14917 AC008687.5-201ENST00000593746 558 ntBASIC17.32■□□□□ 0.36
PCDH17O14917 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH17O14917 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH17O14917 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PCDH17O14917 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH17O14917 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDH17O14917 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 AP000997.3-201ENST00000623333 2250 ntBASIC17.32■□□□□ 0.36
PCDH17O14917 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDH17O14917 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PCDH17O14917 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDH17O14917 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH17O14917 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PCDH17O14917 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH17O14917 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PCDH17O14917 MIR662-201ENST00000384847 95 ntBASIC17.31■□□□□ 0.36
PCDH17O14917 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.31■□□□□ 0.36
PCDH17O14917 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
PCDH17O14917 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDH17O14917 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDH17O14917 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 AL391807.1-203ENST00000604392 2365 ntBASIC17.31■□□□□ 0.36
PCDH17O14917 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDH17O14917 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDH17O14917 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDH17O14917 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH17O14917 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDH17O14917 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH17O14917 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDH17O14917 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH17O14917 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDH17O14917 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDH17O14917 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDH17O14917 KRT18P48-201ENST00000434763 852 ntBASIC17.3■□□□□ 0.36
PCDH17O14917 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDH17O14917 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.3■□□□□ 0.36
PCDH17O14917 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH17O14917 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDH17O14917 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDH17O14917 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH17O14917 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDH17O14917 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDH17O14917 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH17O14917 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms