Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC104819.1-201ENST00000504587 486 ntBASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RPAP1Q9BWH6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RPAP1Q9BWH6 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RPAP1Q9BWH6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RPAP1Q9BWH6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 AC009078.2-202ENST00000463353 338 ntBASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 AC233702.3-201ENST00000578656 1387 ntBASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 KRT89P-201ENST00000620027 1478 ntBASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 AC068880.1-201ENST00000507289 2297 ntBASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC22.01■■□□□ 1.11
RPAP1Q9BWH6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RPAP1Q9BWH6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC22■■□□□ 1.11
RPAP1Q9BWH6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 AC079781.3-201ENST00000449110 356 ntBASIC22■■□□□ 1.11
RPAP1Q9BWH6 FOSL1P1-201ENST00000511041 816 ntBASIC22■■□□□ 1.11
RPAP1Q9BWH6 AC106795.1-205ENST00000512851 1056 ntBASIC22■■□□□ 1.11
RPAP1Q9BWH6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 BMF-207ENST00000559701 630 ntTSL 3 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 AC091304.2-201ENST00000564639 760 ntBASIC22■■□□□ 1.11
RPAP1Q9BWH6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 AL592071.1-201ENST00000611956 408 ntBASIC22■■□□□ 1.11
RPAP1Q9BWH6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22■■□□□ 1.11
RPAP1Q9BWH6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22■■□□□ 1.11
RPAP1Q9BWH6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC22■■□□□ 1.11
RPAP1Q9BWH6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC22■■□□□ 1.11
RPAP1Q9BWH6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RPAP1Q9BWH6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
RPAP1Q9BWH6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RPAP1Q9BWH6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 ABALON-201ENST00000629058 1903 ntBASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 AC009102.3-201ENST00000623118 1491 ntBASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
RPAP1Q9BWH6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms